current user: public

anford Burnham Prebys Medical Discovery Institute
We are hiring bioinformatics experts and software developers. Join us!

Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

Page size:   Sort by score   Show only entries containing string:

Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 968next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|15604718|ref|NP_219502.1| hypothetical protein (CT875) [Chlamydia trachomatis D/UW-3/CX] 591 JCSG0516 1-389 -6.310 14  TM0231 TM0231 282110 PDB-2002-08-29
2 gi|15604719|ref|NP_219503.1| hypothetical protein (CT001) [Chlamydia trachomatis D/UW-3/CX] 90 JCSG0516 10-64 -7.990 C.LS21372A NP_421772.1 430505 Selected-2011-09-02
3 gi|15604720|ref|NP_219504.1| aspartyl/glutamyl-tRNA amidotransferase subunit C (CT002) [Chlamydia trachomatis D/UW-3/CX] 100 JCSG0516 3-100 -58.500 25  TB4913D 10173279 356740 Purified-2004-05-26
4 gi|15604721|ref|NP_219505.1| aspartyl/glutamyl-tRNA amidotransferase subunit A (CT003) [Chlamydia trachomatis D/UW-3/CX] 491 JCSG0516 1-485 -149.000 43  TM1272 TM1272 283137 PDB-2006-03-28
5 gi|15604722|ref|NP_219506.1| aspartyl/glutamyl-tRNA amidotransferase subunit B (CT004) [Chlamydia trachomatis D/UW-3/CX] 488 JCSG0516 6-486 -163.000 39  TM1273 TM1273 283138 Purified-2004-09-17
6 gi|15604723|ref|NP_219507.1| hypothetical protein (CT005) [Chlamydia trachomatis D/UW-3/CX] 363 JCSG0516 16-147 -8.890 10  TM1016 TM1016 282883 Purified-2001-10-30
7 gi|15604724|ref|NP_219508.1| hypothetical protein (CT006) [Chlamydia trachomatis D/UW-3/CX] 189 JCSG0516 114-188 -8.050 13  SP2008O YP_001272213.1 411946 Purified-2010-11-20
8 gi|15604725|ref|NP_219509.1| hypothetical protein (CT007) [Chlamydia trachomatis D/UW-3/CX] 316 JCSG0516 1-316 -22.200 SP17630A YP_974886.1 412362 Purified-2010-09-29
9 gi|15604726|ref|NP_219510.1| ribonuclease HIII (CT008) [Chlamydia trachomatis D/UW-3/CX] 300 JCSG0516 62-299 -57.700 18  MA16104A NP_006388.2 400400 Purified-2009-03-13
10 gi|15604727|ref|NP_219511.1| HTH transcriptional regulator (CT009) [Chlamydia trachomatis D/UW-3/CX] 143 JCSG0516 5-137 -43.900 27  TM1864 TM1864 283716 Purified-2001-11-28
11 gi|15604728|ref|NP_219512.1| lipid A biosynthesis lauroyl acyltransferase (CT010) [Chlamydia trachomatis D/UW-3/CX] 455 JCSG0516 6-326 -83.500 26  RH6159D AFE_2790 416369 Selected-2009-12-04
13-359 -71.300 17  RH6159E YP_001712836.1 415443 Selected-2009-12-04
12 gi|15604729|ref|NP_219513.1| hypothetical protein (CT011) [Chlamydia trachomatis D/UW-3/CX] 418 JCSG0516 4-418 -61.000 10  SP17805B ZP_02432145.1 410267 Selected-2009-11-12
13 gi|15604730|ref|NP_219514.1| hypothetical protein (CT012) [Chlamydia trachomatis D/UW-3/CX] 264 JCSG0516 106-257 -32.100 21  TM0200 TM0200 282080 Diffraction|HSQC-2008-01-29
14 gi|15604731|ref|NP_219515.1| cytochrome d ubiquinol oxidase subunit I (CT013) [Chlamydia trachomatis D/UW-3/CX] 446 JCSG0516 19-146 -5.880 17  C.JNH21312M NP_295078.1 430143 Selected-2013-07-30
15 gi|15604732|ref|NP_219516.1| cytochrome d ubiquinol oxidase subunit II (CT014) [Chlamydia trachomatis D/UW-3/CX] 353 JCSG0516 27-353 -6.910 WT3819A.HTATSF1 BC009896 422557 Selected-2010-11-11
16 gi|15604733|ref|NP_219517.1| ATPase (CT015) [Chlamydia trachomatis D/UW-3/CX] 434 JCSG0516 3-434 -132.000 44  PL0495B YP_384263.1 401476 Purified-2009-08-27
17 gi|15604734|ref|NP_219518.1| hypothetical protein (CT016) [Chlamydia trachomatis D/UW-3/CX] 242 JCSG0516 117-226 -7.480 17  RH12835A NP_951781.1 416445 Selected-2009-12-04
18 gi|15604735|ref|NP_219519.1| hypothetical protein (CT017) [Chlamydia trachomatis D/UW-3/CX] 433 JCSG0516 1-431 -30.500 12  PX5305A NP_979181.1 395636 PDB-2009-04-17
27-425 -61.000 11  SP5305BV YP_001087626.1 409999 Purified-2010-09-29
19 gi|15604736|ref|NP_219520.1| hypothetical protein (CT018) [Chlamydia trachomatis D/UW-3/CX] 157 JCSG0516 9-115 -6.670 15  TM0890 TM0890 282759 Selected-2001-10-12
20 gi|15604737|ref|NP_219521.1| isoleucyl-tRNA synthetase (CT019) [Chlamydia trachomatis D/UW-3/CX] (Range: 1-500) 500 JCSG0516 2-486 -75.900 30  TM1361 TM1361 283222 Selected-2001-10-12


FFAS is supported by the NIH grant R01-GM087218-01
9 9 7 8 3   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ye Y, Godzik A. FATCAT: a web server for flexible structure comparison and structure similarity searching. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W582-5.