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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|30260196|ref|NP_842573.1| chromosomal replication initiation protein (BA_0001) [Bacillus anthracis str. Ames] 446 COG0516 3-446 -132.000 41  [L] COG0593 ATPase involved in DNA replication initiation
H.sapiens 5-355 -10.200 14  sp|Q9UN37|VPS4A_HUMAN Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1
54-324 -11.100 16  sp|P46459|NSF_HUMAN Vesicle-fusing ATPase OS=Homo sapiens GN=NSF PE=1 SV=3 (Range: 151-450)
121-440 -10.600 16  sp|O43929|ORC4_HUMAN Origin recognition complex subunit 4 OS=Homo sapiens GN=ORC4L PE=1 SV=2
147-285 -12.500 21  sp|O43933|PEX1_HUMAN Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1 (Range: 451-750)
147-354 -12.000 16  sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1 SV=1 (Range: 601-856)
147-399 -11.700 14  sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens GN=ATAD2 PE=1 SV=1 (Range: 451-750)
HGM_OVER 180-333 -3.540 11  HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304;
JCSG0516 1-446 -127.000 32  C.LS21333A NP_418828.1 430427 Purified-2014-07-08
NEW_HUMAN_DOMAINS 126-263 -5.760 13  sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2 (Range: 687-863)
PDB0516 7-446 -132.000 37  2z4r_A mol:protein length:440 Chromosomal replication initiator protein dna
PfamA30U 5-68 -16.400 20  PF11638.6; DNAA_LAWIP/5-67; DnaA N-terminal domain
111-329 -109.000 72  PF00308.16; DNAA_STRCO/317-535; Bacterial dnaA protein
356-424 -37.600 68  PF08299.9; D9QS97_ACEAZ/358-426; Bacterial dnaA protein helix-turn-helix
SCOP206 109-324 -101.000 42  d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
341-446 -46.100 30  d1l8qa1 a.4.12.2 (A:290-399) Chromosomal replication initiation factor DnaA C-terminal domain IV {Aquifex aeolicus [TaxId: 63363]}
VFDB 147-382 -6.880 14  VFG002380(gi:15611004) (eccA1) ESX-1 type VII secretion system AAA+ ATPase EccA1 [ESX-1 (VF0315)] [Mycobacterium tuberculosis H37Rv]
2 gi|30260197|ref|NP_842574.1| DNA polymerase III subunit beta (BA_0002) [Bacillus anthracis str. Ames] 379 COG0516 1-379 -89.700 26  [L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog)
H.sapiens 134-374 -9.440 13  sp|Q99638|RAD9A_HUMAN Cell cycle checkpoint control protein RAD9A OS=Homo sapiens GN=RAD9A PE=1 SV=1
HGM_OVER 209-360 -2.320 15  PB011023 A7V2G7_BACUN/1-167 PB011023; Pfam-B_11023;
JCSG0516 1-378 -107.000 41  XB5465A NP_344555.1 358603 PDB-2005-08-31
NEW_HUMAN_DOMAINS 88-346 -5.370 11  sp|Q8IX01|SUGP2_HUMAN SURP and G-patch domain-containing protein 2 OS=Homo sapiens GN=SUGP2 PE=1 SV=2 (Range: 297-540)
PDB0516 1-379 -115.000 74  4tr6_A mol:protein length:380 DNA polymerase III subunit beta
PfamA30U 1-126 -38.500 29  PF00712.17; DPO3B_CAUCR/1-121; DNA polymerase III beta subunit, N-terminal domain
136-252 -48.900 30  PF02767.14; DPO3B_PSEPK/129-244; DNA polymerase III beta subunit, central domain
254-377 -58.800 73  PF02768.13; DPO3B_BACSU/253-376; DNA polymerase III beta subunit, C-terminal domain
SCOP206 1-127 -46.500 21  d1vpka1 d.131.1.1 (A:1-120) DNA polymerase III, beta subunit {Thermotoga maritima [TaxId: 2336]}
130-253 -52.200 27  d4k3la2 d.131.1.1 (A:123-244) DNA polymerase III, beta subunit {Escherichia coli [TaxId: 562]}
254-378 -46.300 30  d1vpka3 d.131.1.1 (A:244-366) DNA polymerase III, beta subunit {Thermotoga maritima [TaxId: 2336]}
VFDB 18-249 -4.240 12  VFG001287(gi:21284317) (icaB) N-deacetylase, involved in polysaccharide intercellular adhesin(PIA) synthesis [Intercellular adhesion proteins (VF0014)] [Staphylococcus aureus subsp. aureus MW2]
3 gi|30260198|ref|NP_842575.1| hypothetical protein (BA_0003) [Bacillus anthracis str. Ames] 70 COG0516 1-70 -50.800 65  [S] COG2501 Uncharacterized conserved protein
H.sapiens 1-60 -10.200 15  sp|Q9P0P8|CF203_HUMAN Uncharacterized protein C6orf203 OS=Homo sapiens GN=C6orf203 PE=1 SV=1
HGM_OVER 21-55 -3.430 PB015266 gi|154494998|ref|ZP_02034003.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]gi|154085548|gb|EDN84593.1| hypothetical protein PARMER_04044 [Parabacteroides merdae ATCC 43184]
JCSG0516 11-60 -12.400 20  SP0223F ZP_04009405.1 413831 Purified-2010-09-29
NEW_HUMAN_DOMAINS 5-68 -6.860 20  sp|Q02241|KIF23_HUMAN Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF23 PE=1 SV=3 (Range: 820-895)
PDB0516 1-69 -39.100 23  1p9k_A mol:protein length:79 orf, hypothetical protein
PfamA30U 4-68 -45.600 40  PF13275.4; D4IXS8_BUTFI/4-68; S4 domain
SCOP206 1-69 -39.200 23  d1o09a1 d.66.1.6 (A:3-79) Hypothetical protein YbcJ {Escherichia coli [TaxId: 562]}
VFDB 1-57 -5.780 17  VFG001393(gi:15608485) (mbtM) Probable fatty acyl-AMP ligase MbtM [FadD33 (VF0308)] [Mycobacterium tuberculosis H37Rv]
4 gi|30260199|ref|NP_842576.1| recombination protein F (BA_0004) [Bacillus anthracis str. Ames] 375 COG0516 1-370 -107.000 24  [L] COG1195 Recombinational DNA repair ATPase (RecF pathway)
H.sapiens 3-254 -16.400 14  sp|Q92878|RAD50_HUMAN DNA repair protein RAD50 OS=Homo sapiens GN=RAD50 PE=1 SV=1 (Range: 1-300)
HGM_OVER 27-375 -2.530 PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]
JCSG0516 1-374 -22.400 15  NT12358C DHAF_12NOV03_CONTIG1086_REVISED_GENE3509 378730 Purified-2008-01-24
NEW_HUMAN_DOMAINS 287-368 -5.850 14  sp|Q7Z7G8|VP13B_HUMAN Vacuolar protein sorting-associated protein 13B OS=Homo sapiens GN=VPS13B PE=1 SV=2 (Range: 1322-1403)
PDB0516 1-373 -119.000 30  2o5v_A mol:protein length:359 DNA replication and repair protein recF
PfamA30U 1-346 -20.400 15  PF13175.4; I1YS32_PREI7/1-378; AAA ATPase domain
SCOP206 1-360 -26.800 17  g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Pyrococcus furiosus [TaxId: 2261]}
VFDB 2-375 -9.840 14  VFG037118(gi:15676638) (recN) DNA repair protein RecN [RecN (VF0457)] [Neisseria meningitidis MC58]
5 gi|30260200|ref|NP_842577.1| DNA gyrase subunit B (BA_0005) [Bacillus anthracis str. Ames] 640 COG0516 4-640 -157.000 57  [L] COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
H.sapiens 2-246 -52.600 23  sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 (Range: 1-300)
88-397 -67.100 20  sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3 (Range: 151-450)
244-541 -78.600 25  sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3 (Range: 301-600)
400-640 -54.600 25  sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3 (Range: 451-750)
HGM_OVER 461-629 -4.230 16  HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;
JCSG0516 9-640 -201.000 55  TM0833 TM0833 282703 Purified-2005-04-05
NEW_HUMAN_DOMAINS 252-393 -7.000 14  sp|Q8N6G2|CM026_HUMAN Uncharacterized protein C13orf26 OS=Homo sapiens GN=C13orf26 PE=2 SV=1 (Range: 105-289)
PDB0516 1-639 -195.000 54  4juo_C mol:protein length:670 DNA topoisomerase 4 subunit B
PfamA30U 227-396 -86.000 48  PF00204.23; A9KS52_CLOPH/226-396; DNA gyrase B
537-635 -21.800 19  PF16898.3; K5XBZ3_PHACS/641-767; C-terminal associated domain of TOPRIM
570-629 -45.500 70  PF00986.19; M9X0E0_MANHA/738-800; DNA gyrase B subunit, carboxyl terminus
SCOP206 21-226 -91.200 74  d4k4oa1 d.122.1.0 (A:18-224) automated matches {Enterococcus faecalis [TaxId: 226185]}
227-398 -86.200 42  d1kija1 d.14.1.3 (A:221-392) DNA gyrase B {Thermus thermophilus [TaxId: 274]}
419-619 -98.100 60  d3m4ia_ e.78.1.1 (A:) DNA gyrase beta-prime domain {Mycobacterium tuberculosis [TaxId: 1773]}
VFDB 1-535 -6.680 10  VFG000434(gi:17233482) (pefC) plasmid-encoded fimbriae usher protein PefC [Pef (VF0104)] [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
6 gi|30260201|ref|NP_842578.1| DNA gyrase subunit A (BA_0006) [Bacillus anthracis str. Ames] 823 COG0516 5-822 -212.000 45  [L] COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
H.sapiens 7-206 -24.300 24  sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 (Range: 601-900)
76-383 -58.100 22  sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 (Range: 751-1050)
236-488 -30.900 18  sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3 (Range: 901-1200)
HGM_OVER 400-487 -3.490 PB045072 _Gut.Meta.Jp.0111663_ gi|163310555|dbj|BABD01000145.1||3 (+ 1662:2028~0 complete)
JCSG0516 7-809 -206.000 46  TM1084 TM1084 282951 Purified-2001-04-24
NEW_HUMAN_DOMAINS 39-167 -5.400 18  sp|Q9H1B7|I2BPL_HUMAN Interferon regulatory factor 2-binding protein-like OS=Homo sapiens GN=IRF2BPL PE=1 SV=1 (Range: 373-516)
PDB0516 3-503 -153.000 83  4ddq_A mol:protein length:502 DNA gyrase subunit A
32-738 -131.000 36  1zvu_A mol:protein length:716 Topoisomerase IV subunit A
503-823 -71.600 36  3uc1_A mol:protein length:327 DNA gyrase subunit A
PfamA30U 34-473 -64.800 21  PF00521.18; A0A0D1DXS4_USTMA/785-1232; DNA gyrase/topoisomerase IV, subunit A
612-657 -14.500 43  PF03989.11; GYRA_HAEIN/641-686; DNA gyrase C-terminal domain, beta-propeller
SCOP206 32-490 -139.000 57  d3ilwa_ e.11.1.0 (A:) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
503-809 -70.300 38  d4g3na_ b.68.10.0 (A:) automated matches {Mycobacterium tuberculosis [TaxId: 83332]}
VFDB 13-575 -6.360 13  VFG002480(gi:53722524) (tssH-5/clpV) Clp-type ATPase chaperone protein [T6SS-1 (VF0429)] [Burkholderia pseudomallei K96243]
7 gi|30260202|ref|NP_842579.1| inosine 5'-monophosphate dehydrogenase (BA_0008) [Bacillus anthracis str. Ames] 487 COG0516 3-477 -124.000 43  [F] KOG2550 IMP dehydrogenase/GMP reductase
H.sapiens 3-477 -124.000 41  sp|P12268|IMDH2_HUMAN Inosine-5`-monophosphate dehydrogenase 2 OS=Homo sapiens GN=IMPDH2 PE=1 SV=2
HGM_OVER 4-179 -4.580 15  PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;
JCSG0516 7-487 -139.000 60  TM1347 TM1347 283208 PDB-2005-02-22
NEW_HUMAN_DOMAINS 30-189 -4.590 15  sp|Q8N1W0|YF005_HUMAN Transmembrane protein FLJ37396 OS=Homo sapiens PE=2 SV=2 (Range: 371-526)
PDB0516 2-487 -142.000 69  1zfj_A mol:protein length:491 INOSINE MONOPHOSPHATE DEHYDROGENASE
PfamA30U 10-474 -132.000 55  PF00478.23; G0AB65_COLFT/7-472; IMP dehydrogenase / GMP reductase domain
SCOP206 2-479 -96.900 58  d4ixha_ c.1.5.0 (A:) automated matches {Cryptosporidium parvum [TaxId: 5807]}
VFDB 14-207 -6.420 22  VFG001971(gi:15792761) (kpsF) D-arabinose 5-phosphate isomerase [Capsule (VF0323)] [Campylobacter jejuni subsp. jejuni NCTC 11168]
8 gi|30260203|ref|NP_842580.1|(removed signalp:1-28) D-alanyl-D-alanine carboxypeptidase (BA_0009) [Bacillus anthracis str. Ames] 407 COG0516 2-397 -71.400 32  [M] COG1686 D-alanyl-D-alanine carboxypeptidase
H.sapiens 1-277 -8.960 14  sp|A8MY62|BLML_HUMAN Putative beta-lactamase-like 1 OS=Homo sapiens GN=LACTBL1 PE=2 SV=2
HGM_OVER 10-176 -3.580 PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete)
JCSG0516 12-270 -21.300 17  SP13251A NP_344563.1 413807 Purified-2010-09-29
NEW_HUMAN_DOMAINS 92-157 -7.610 17  sp|Q6P988|NOTUM_HUMAN Protein notum homolog OS=Homo sapiens GN=NOTUM PE=2 SV=2 (Range: 421-496)
PDB0516 1-377 -118.000 37  1xp4_A mol:protein length:379 D-alanyl-D-alanine carboxypeptidase
2-407 -109.000 25  3hum_A mol:protein length:453 Penicillin-binding protein 4
PfamA30U 2-256 -72.500 34  PF00768.18; DACC_ECOLI/28-266; D-alanyl-D-alanine carboxypeptidase
275-377 -22.400 21  PF07943.11; DACA_HAEIN/282-373; Penicillin-binding protein 5, C-terminal domain
SCOP206 6-275 -107.000 44  d1xp4a2 e.3.1.1 (A:25-293) D,D-carboxypeptidase DacA, N-terminal domain {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
276-369 -27.100 18  d1xp4a1 b.105.1.1 (A:294-386) D,D-carboxypeptidase DacA, C-terminal domain {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
VFDB 1-294 -4.330 11  VFG000465(gi:16764449) (sopB/sigD) type III secretion system effector SopB, phosphoinositide phosphatase [TTSS(SPI-1 encode) (VF0116)] [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
9 gi|30260204|ref|NP_842581.1| pyridoxal biosynthesis lyase PdxS (BA_0010) [Bacillus anthracis str. Ames] 295 COG0516 2-295 -127.000 65  [H] KOG1606 Stationary phase-induced protein, SOR/SNZ family
H.sapiens 16-279 -8.980 16  sp|Q12882|DPYD_HUMAN Dihydropyrimidine dehydrogenase [NADP+] OS=Homo sapiens GN=DPYD PE=1 SV=2 (Range: 601-900)
HGM_OVER 26-200 -3.620 16  HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242;
JCSG0516 14-252 -8.710 20  TM0140 TM0140 282020 PDB-2002-07-03
NEW_HUMAN_DOMAINS 40-92 -6.690 17  sp|Q96AQ9|F131C_HUMAN Protein FAM131C OS=Homo sapiens GN=FAM131C PE=2 SV=2 (Range: 1-119)
PDB0516 2-295 -126.000 67  2zbt_A mol:protein length:297 Pyridoxal biosynthesis lyase pdxS
PfamA30U 7-213 -104.000 60  PF01680.15; A7SXL5_NEMVE/41-247; SOR/SNZ family
15-256 -11.200 18  PF05690.12; THIG_XANCP/11-258; Thiazole biosynthesis protein ThiG
SCOP206 2-276 -123.000 69  d2zbta_ c.1.2.6 (A:) automated matches {Thermus thermophilus HB8 [TaxId: 300852]}
VFDB 4-228 -4.470 18  VFG043209(gi:123442801) (cheD) methyl-accepting chemotaxis protein CheD [peritrichous flagella (AI145)] [Yersinia enterocolitica subsp. enterocolitica 8081]
10 gi|30260205|ref|NP_842582.1| glutamine amidotransferase subunit PdxT (BA_0011) [Bacillus anthracis str. Ames] 196 COG0516 2-187 -99.000 44  [H] COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis
H.sapiens 4-193 -18.000 18  sp|Q92820|GGH_HUMAN(removed signalp:1-20) Gamma-glutamyl hydrolase OS=Homo sapiens GN=GGH PE=1 SV=2
HGM_OVER 65-190 -3.440 10  PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;
JCSG0516 2-196 -25.800 19  GS13863A YP_001304547.1 384475 Purified-2008-06-17
NEW_HUMAN_DOMAINS 63-116 -4.610 15  sp|Q8WWL2|SPIR2_HUMAN Protein spire homolog 2 OS=Homo sapiens GN=SPIRE2 PE=1 SV=3 (Range: 627-714)
PDB0516 1-196 -109.000 66  2nv2_B mol:protein length:204 Glutamine amidotransferase subunit pdxT
PfamA30U 6-187 -86.800 37  PF01174.17; SNO3_YEAST/7-217; SNO glutamine amidotransferase family
SCOP206 1-195 -110.000 67  d2nv0a_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]}
VFDB 2-192 -19.900 16  VFG011668(gi:15792735) (Cj1417c) amidotransferase [Capsule biosynthesis and transport (CVF393)] [Campylobacter jejuni subsp. jejuni NCTC 11168]
11 gi|30260206|ref|NP_842583.1| seryl-tRNA synthetase (BA_0012) [Bacillus anthracis str. Ames] 424 COG0516 1-424 -138.000 75  [J] COG0172 Seryl-tRNA synthetase
H.sapiens 1-424 -114.000 30  sp|Q9NP81|SYSM_HUMAN Seryl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=SARS2 PE=1 SV=1
HGM_OVER 261-367 -3.120 13  PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]
JCSG0516 1-419 -136.000 56  TM1379 TM1379 283240 Crystal|NMR-2004-06-10
NEW_HUMAN_DOMAINS 33-105 -5.590 12  tr|B5MDG7|B5MDG7_HUMAN Uncharacterized protein OS=Homo sapiens GN=HMG20B PE=4 SV=2 (Range: 199-286)
PDB0516 1-419 -135.000 58  2dq3_A mol:protein length:425 Seryl-tRNA synthetase
PfamA30U 1-107 -27.100 22  PF02403.20; C5WTV8_SORBI/1-114; Seryl-tRNA synthetase N-terminal domain
SCOP206 1-113 -40.100 32  d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
117-419 -111.000 41  d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
VFDB 1-250 -12.100 13  VFG045487(gi:52840451) (ravF) Dot/Icm type IV secretion system effector RavF [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
12 gi|30260207|ref|NP_842584.1| hypothetical protein (BA_0013) [Bacillus anthracis str. Ames] 183 COG0516 64-180 -7.540 17  [R] COG3413 Predicted DNA binding protein
H.sapiens 108-169 -8.600 16  sp|Q8N3X6|LCORL_HUMAN Ligand-dependent nuclear receptor corepressor-like protein OS=Homo sapiens GN=LCORL PE=2 SV=4 (Range: 451-602)
HGM_OVER 45-175 -3.990 12  PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;
JCSG0516 49-181 -8.000 21  KN.B21271A.GTF2B BC020597 429637 Selected-2013-03-25
NEW_HUMAN_DOMAINS 60-93 -5.990 29  sp|P49792|RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2 (Range: 860-909)
PDB0516 19-150 -9.720 17  4lg2_A mol:protein length:146 Polymerase cofactor
PfamA30U 123-178 -8.780 12  PF06163.9; A0A070SGS2_ECOLX/1-127; Bacterial protein of unknown function (DUF977 topsan)
SCOP206 83-177 -7.460 13  d1i3ja_ d.285.1.1 (A:) DNA-binding domain of intron endonuclease I-TevI {Bacteriophage T4 [TaxId: 10665]}
VFDB 115-176 -9.200 11  VFG012327(gi:91210136) (sfaC) S fimbrial switch regulatory protein SfaC [S fimbriae (VF0222)] [Escherichia coli UTI89]
13 gi|30260208|ref|NP_842585.1| deoxynucleoside kinase family protein (BA_0014) [Bacillus anthracis str. Ames] 222 COG0516 11-216 -83.400 38  [F] COG1428 Deoxynucleoside kinases
H.sapiens 1-218 -72.400 22  sp|O00142|KITM_HUMAN Thymidine kinase 2, mitochondrial OS=Homo sapiens GN=TK2 PE=1 SV=4
HGM_OVER 29-222 -3.100 10  PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;
JCSG0516 14-217 -20.100 14  XB5769A 13814386 358907 Purified-2005-05-02
NEW_HUMAN_DOMAINS 1-36 -6.870 sp|Q6P2S7|GNN_HUMAN Tetratricopeptide repeat protein GNN OS=Homo sapiens GN=GNN PE=2 SV=3 (Range: 217-335)
PDB0516 12-213 -84.000 29  2jas_A mol:protein length:206 DEOXYGUANOSINE KINASE
PfamA30U 15-215 -96.300 69  PF01712.17; DCK_BACSU/12-212; Deoxynucleoside kinase
SCOP206 14-210 -83.800 30  d2jaqa_ c.37.1.0 (A:) automated matches {Mycoplasma mycoides [TaxId: 44101]}
VFDB 10-211 -10.400 18  VFG001988(gi:15792733) (cysC) adenylylsulfate kinase [Capsule (VF0323)] [Campylobacter jejuni subsp. jejuni NCTC 11168]
14 gi|30260209|ref|NP_842586.1| deoxynucleoside kinase family protein (BA_0015) [Bacillus anthracis str. Ames] 211 COG0516 2-208 -78.600 23  [F] COG1428 Deoxynucleoside kinases
H.sapiens 1-209 -71.200 19  sp|O00142|KITM_HUMAN Thymidine kinase 2, mitochondrial OS=Homo sapiens GN=TK2 PE=1 SV=4
HGM_OVER 6-150 -4.180 10  PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]
JCSG0516 5-209 -23.100 11  XB5769A 13814386 358907 Purified-2005-05-02
NEW_HUMAN_DOMAINS 2-152 -6.090 10  sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2 (Range: 687-863)
PDB0516 4-205 -79.800 24  2jas_A mol:protein length:206 DEOXYGUANOSINE KINASE
PfamA30U 7-207 -86.900 30  PF01712.17; DCK_BACSU/12-212; Deoxynucleoside kinase
SCOP206 5-202 -79.600 24  d2jaqa_ c.37.1.0 (A:) automated matches {Mycoplasma mycoides [TaxId: 44101]}
VFDB 5-205 -9.650 11  VFG002382(gi:15611006) (eccCa1) ESX-1 type VII secretion system FtsK/SpoIIIE family protein EccCa1 [ESX-1 (VF0315)] [Mycobacterium tuberculosis H37Rv]
15 gi|30260210|ref|NP_842587.1| isochorismatase family protein (BA_0016) [Bacillus anthracis str. Ames] 179 COG0516 2-177 -63.200 24  [Q] COG1535 Isochorismate hydrolase
H.sapiens 2-179 -32.600 18  sp|Q96CN7|ISOC1_HUMAN Isochorismatase domain-containing protein 1 OS=Homo sapiens GN=ISOC1 PE=1 SV=3
HGM_OVER 8-177 -4.640 PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;
JCSG0516 2-171 -77.000 26  TM0475 TM0475 282348 Purified-2004-01-07
NEW_HUMAN_DOMAINS 23-125 -6.480 12  tr|E7EWK8|E7EWK8_HUMAN Uncharacterized protein OS=Homo sapiens GN=PLOD1 PE=4 SV=2 (Range: 19-216)
PDB0516 3-176 -80.300 29  3eef_A mol:protein length:182 N-carbamoylsarcosine amidase related protein
PfamA30U 5-175 -58.400 19  PF00857.18; Q0KD49_CUPNH/23-199; Isochorismatase family
SCOP206 1-176 -82.300 24  d3hb7a1 c.33.1.0 (A:1-184) automated matches {Alkaliphilus metalliredigens [TaxId: 293826]}
VFDB 2-177 -57.200 25  VFG000933(gi:26246574) (entB) isochorismatase [Enterobactin (VF0228)] [Escherichia coli CFT073]
16 gi|30260211|ref|NP_842588.1|(removed signalp:1-24) hypothetical protein (BA_0017) [Bacillus anthracis str. Ames] 22 COG0516 1-16 -2.730 31  [S] COG3908 Uncharacterized protein conserved in bacteria
H.sapiens 1-18 -4.280 22  sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2 (Range: 901-1112)
HGM_OVER 5-20 -1.310 18  PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;
JCSG0516 1-22 -3.970 27  SP18643A YP_001333818.1 411757 Selected-2009-11-12
NEW_HUMAN_DOMAINS 6-18 -3.870 30  sp|Q8NGG3|OR5T3_HUMAN Olfactory receptor 5T3 OS=Homo sapiens GN=OR5T3 PE=2 SV=3 (Range: 1-55)
PDB0516 1-21 -4.730 28  2dcw_A mol:protein length:42 Tachystatin-B2
PfamA30U 1-21 -4.730 28  PF11478.6; TACB2_TACTR/1-42; Antimicrobial chitin binding protein tachystatin B
SCOP206 3-19 -3.350 41  d1q3ja_ g.3.4.2 (A:) Antifungal peptide Alo3 {Acrocinus longimanus [TaxId: 227548]}
VFDB 6-18 -1.930 VFG041300(gi:52842166) (lem17) Dot/Icm type IV secretion system effector Lem17 [Dot/Icm (SS047)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
17 gi|30260212|ref|NP_842589.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein (BA_0018) [Bacillus anthracis str. Ames] 166 COG0516 1-166 -96.700 48  [FJ] COG0590 Cytosine/adenosine deaminases
H.sapiens 1-166 -85.200 28  sp|Q7Z6V5|ADAT2_HUMAN tRNA-specific adenosine deaminase 2 OS=Homo sapiens GN=ADAT2 PE=1 SV=1
HGM_OVER 26-154 -3.610 11  PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;
JCSG0516 6-154 -32.800 38  TM1828 TM1828 283681 PDB-2006-08-04
NEW_HUMAN_DOMAINS 80-138 -6.300 12  sp|Q96T75|DSCR8_HUMAN Down syndrome critical region protein 8 OS=Homo sapiens GN=DSCR8 PE=2 SV=2 (Range: 1-97)
PDB0516 2-158 -104.000 63  2b3j_A mol:protein length:159 tRNA adenosine deaminase
PfamA30U 4-151 -100.000 53  PF14437.4; D4IXV5_BUTFI/25-172; MafB19-like deaminase
SCOP206 1-163 -105.000 44  d2nx8a_ c.97.1.0 (A:) automated matches {Streptococcus pyogenes [TaxId: 301450]}
VFDB 2-122 -4.810 14  VFG000619(gi:56480401) (iutA) aerobactin receptor IutA [Aerobactin (VF0123)] [Shigella flexneri 2a str. 301]
18 gi|30260213|ref|NP_842590.1| DNA polymerase III subunits gamma and tau (BA_0019) [Bacillus anthracis str. Ames] 562 COG0516 1-562 -156.000 53  [L] COG2812 DNA polymerase III, gamma/tau subunits
H.sapiens 8-367 -41.500 22  sp|P35250|RFC2_HUMAN Replication factor C subunit 2 OS=Homo sapiens GN=RFC2 PE=1 SV=3
HGM_OVER 8-221 -3.640 14  PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;
JCSG0516 4-536 -133.000 33  TM0686 TM0686 282556 Purified-2001-02-28
NEW_HUMAN_DOMAINS 26-172 -5.360 15  sp|Q68BL8|OLM2B_HUMAN Olfactomedin-like protein 2B OS=Homo sapiens GN=OLFML2B PE=2 SV=2 (Range: 30-179)
PDB0516 1-243 -92.600 54  1njf_A mol:protein length:250 DNA polymerase III subunit gamma
1-357 -91.400 43  3glf_B mol:protein length:395 DNA polymerase III subunit tau
22-442 -11.900 11  4xgc_D mol:protein length:459 Origin recognition complex subunit 4
431-561 -10.000 12  4iqj_M mol:protein length:177 C-terminal domain of the DNA polymerase III s
PfamA30U 1-224 -37.200 17  PF06068.11; RUVB2_CAEEL/17-408; TIP49 C-terminus
9-308 -18.400 12  PF03215.13; RAD24_YEAST/58-575; Rad17 cell cycle checkpoint protein
21-178 -68.000 32  PF13177.4; A5VIC8_LACRD/13-171; DNA polymerase III, delta subunit
232-358 -15.500 20  PF12169.6; Q11B01_CHESB/247-389; DNA polymerase III subunits gamma and tau domain III
SCOP206 5-243 -90.700 53  d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
18-301 -12.700 17  d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
243-357 -10.400 18  d1jr3a1 a.80.1.1 (A:243-368) gamma subunit {Escherichia coli [TaxId: 562]}
VFDB 13-272 -17.500 17  VFG002401(gi:15608935) (eccA5) ESX-5 type VII secretion system AAA+ ATPase EccA5 [ESX-5 (VF0402)] [Mycobacterium tuberculosis H37Rv]
19 gi|30260214|ref|NP_842591.1| hypothetical protein (BA_0020) [Bacillus anthracis str. Ames] 109 COG0516 5-108 -59.400 37  [S] COG0718 Uncharacterized protein conserved in bacteria
H.sapiens 9-98 -6.530 13  sp|Q8NDM7|CJ079_HUMAN WD repeat-containing protein C10orf79 OS=Homo sapiens GN=C10orf79 PE=2 SV=3 (Range: 1201-1500)
HGM_OVER 8-74 -4.400 10  HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580;
JCSG0516 4-108 -52.800 23  TM0687 TM0687 282557 Purified-2001-02-22
NEW_HUMAN_DOMAINS 14-109 -5.440 13  sp|Q8N3G9|TM130_HUMAN Transmembrane protein 130 OS=Homo sapiens GN=TMEM130 PE=2 SV=1 (Range: 32-176)
PDB0516 2-109 -57.300 56  1ybx_A mol:protein length:143 Conserved hypothetical protein
PfamA30U 13-102 -52.200 37  PF02575.14; V5SI04_9RHIZ/8-98; YbaB/EbfC DNA-binding family
SCOP206 9-99 -54.000 59  d1ybxa_ d.222.1.0 (A:) automated matches {Clostridium thermocellum [TaxId: 1515]}
VFDB 8-100 -13.500 13  VFG002392(gi:15610750) (espD) ESX-1 type VII secretion system EspD [ESX-1 (VF0315)] [Mycobacterium tuberculosis H37Rv]
20 gi|30260215|ref|NP_842592.1| recombination protein RecR (BA_0021) [Bacillus anthracis str. Ames] 198 COG0516 1-198 -102.000 42  [L] COG0353 Recombinational DNA repair protein (RecF pathway)
H.sapiens 27-197 -10.100 14  sp|Q86X67|NUD13_HUMAN Nucleoside diphosphate-linked moiety X motif 13 OS=Homo sapiens GN=NUDT13 PE=2 SV=3
HGM_OVER 112-198 -4.230 34  PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF
JCSG0516 29-193 -8.970 18  1790429 1790429 355840 PDB-2004-04-30
NEW_HUMAN_DOMAINS 4-183 -5.600 12  sp|Q8IZY2|ABCA7_HUMAN ATP-binding cassette sub-family A member 7 OS=Homo sapiens GN=ABCA7 PE=1 SV=3 (Range: 1261-1427)
PDB0516 2-198 -108.000 64  3vdp_A mol:protein length:212 Recombination protein recR
PfamA30U 39-78 -19.200 32  PF02132.13; R6YA57_9FIRM/41-80; RecR protein
80-171 -53.400 53  PF13662.4; RECR_RHOFT/80-171; Toprim domain
SCOP206 2-198 -110.000 64  d3vdpa_ e.49.1.1 (A:) Recombination protein RecR {Thermoanaerobacter tengcongensis [TaxId: 273068]}
VFDB 54-180 -7.080 14  VFG012019(gi:15792639) (pseA) pseudaminic acid biosynthesis PseA protein [Pse5Ac7Ac, Pse5Ac7Am, Pse8OAc, Pse5Am7AcGlnAc (AI151)] [Campylobacter jejuni subsp. jejuni NCTC 11168]


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ye Y, Godzik A. FATCAT: a web server for flexible structure comparison and structure similarity searching. Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W582-5.