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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 13760next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 d1dlwa_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Ciliate (Paramecium caudatum) [TaxId: 5885]} 116 JCSG0516 1-116 -6.890 FL11062B NP_149192.1 376317 Crystal|NMR-2007-06-08
2 d2gkma_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbN [TaxId: 1773]} 127 JCSG0516 1-127 -6.960 FL11062B NP_149192.1 376317 Crystal|NMR-2007-06-08
3 d2qrwa_ a.1.1.1 (A:) Protozoan/bacterial hemoglobin {Mycobacterium tuberculosis, HbO [TaxId: 1773]} 126 JCSG0516 13-98 -8.490 18  TM0603 TM0603 282476 PDB-2004-09-16
4 d2bkma_ a.1.1.1 (A:) automated matches {Geobacillus stearothermophilus [TaxId: 1422]} 128 JCSG0516 16-126 -7.360 11  TM0603 TM0603 282476 PDB-2004-09-16
5 d4i0va_ a.1.1.1 (A:) automated matches {Synechococcus sp. [TaxId: 32049]} 123 JCSG0516 2-123 -6.170 13  SP17774A ZP_02421418.1 411235 Selected-2009-11-12
6 d1asha_ a.1.1.2 (A:) Ascaris hemoglobin, domain 1 {Pig roundworm (Ascaris suum) [TaxId: 6253]} 147 JCSG0516 1-143 -7.930 13  PK9814B YP_413382.1 389379 Crystal|NMR-2008-06-26
7 d2dc3a_ a.1.1.2 (A:) Cytoglobin {Human (Homo sapiens) [TaxId: 9606]} 172 JCSG0516 4-144 -7.980 PK9814B YP_413382.1 389379 Crystal|NMR-2008-06-26
8 d4hsxa_ a.1.1.2 (A:) Dehaloperoxidase {Amphitrite ornata [TaxId: 129555]} 137 JCSG0516 24-119 -6.770 12  RF20619A.CABIN1 BC054497 421217 Purified-2010-12-07
9 d1ecaa_ a.1.1.2 (A:) Erythrocruorin {Midge (Chironomus thummi thummi), fraction III [TaxId: 7154]} 136 JCSG0516 1-136 -7.510 11  KN.B21273A.PROX1 BC024201 429645 Purified-2014-04-10
10 d1x9fd_ a.1.1.2 (D:) Extracellular dodecameric hemoglobin (erythrocruorin), subunit D1 {Common earthworm (Lumbricus terrestris) [TaxId: 6398]} 140 JCSG0516 3-137 -8.030 16  PG9814B NP_284435.1 372229 Purified-2006-12-13
11 d1x9fc_ a.1.1.2 (C:) Extracellular dodecameric hemoglobin (erythrocruorin), subunit III (globin C) {Common earthworm (Lumbricus terrestris) [TaxId: 6398]} 149 JCSG0516 6-143 -7.720 12  PK9814B YP_413382.1 389379 Crystal|NMR-2008-06-26
12 d1cqxa1 a.1.1.2 (A:1-150) Flavohemoglobin, N-terminal domain {Alcaligenes eutrophus [TaxId: 106590]} 150 JCSG0516 28-146 -8.210 12  TB5252A 13815007 358088 Purified-2004-07-15
13 d1jl7a_ a.1.1.2 (A:) Glycera globin {Marine bloodworm (Glycera dibranchiata) [TaxId: 6350]} 147 JCSG0516 12-128 -6.210 FM12207A YP_001813159.1 377609 PDB-2008-01-22
14 d1it2a_ a.1.1.2 (A:) Hagfish hemoglobin {Inshore hagfish (Eptatretus burgeri) [TaxId: 7764]} 146 JCSG0516 12-133 -7.990 11  PK9814B YP_413382.1 389379 Crystal|NMR-2008-06-26
15 d1or4a_ a.1.1.2 (A:) Heme-based aerotactic transducer HemAT, sensor domain {Bacillus subtilis [TaxId: 1423]} 169 JCSG0516 1-165 -6.730 SP16541B ZP_02066110.1 408077 PDB-2011-11-22
16 d1itha_ a.1.1.2 (A:) Hemoglobin {Innkeeper worm (Urechis caupo) [TaxId: 6431]} 141 JCSG0516 3-138 -8.350 PG9814B NP_284435.1 372229 Purified-2006-12-13
17 d3g46a_ a.1.1.2 (A:) Hemoglobin I {Ark clam (Scapharca inaequivalvis) [TaxId: 6561]} 146 JCSG0516 11-145 -8.570 10  PG9814B NP_284435.1 372229 Purified-2006-12-13
18 d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId: 244486]} 142 JCSG0516 3-137 -8.700 11  PG9814B NP_284435.1 372229 Purified-2006-12-13
19 d1gcva_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Houndshark (Mustelus griseus) [TaxId: 89020]} 140 JCSG0516 33-125 -7.520 13  MJ10001K YP_001084108.1 402146 Purified-2009-11-14
20 d3d1kb_ a.1.1.2 (B:) Hemoglobin, beta-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]} 146 JCSG0516 27-135 -6.540 12  SP7807AE YP_001297902.1 409826 Selected-2009-11-12


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Slabinski L, Jaroszewski L, Rychlewski L, Wilson IA, Lesley SA, Godzik A. XtalPred: a web server for prediction of protein crystallizability. Bioinformatics. 2007 Dec 15;23(24):3403-5. Epub 2007 Oct 5.