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anford Burnham Prebys Medical Discovery Institute
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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 7012next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 142-330) 189 PfamA30U 70-120 -7.020 11  PF05644.9; A8E7S0_DANRE/12-286; Mitochondrial and peroxisomal fission factor Mff
2 sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 362-412) 51 PfamA30U 9-49 -6.990 20  PF08733.8; C5DBC4_LACTC/18-368; PalH/RIM21
3 sp|A0AVF1|TTC26_HUMAN Tetratricopeptide repeat protein 26 OS=Homo sapiens GN=TTC26 PE=2 SV=1 (Range: 486-554) 69 PfamA30U 13-64 -6.130 15  PF10820.6; A7MRM7_CROS8/1-81; Protein of unknown function (DUF2543 topsan)
4 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 1-215) 215 PfamA30U 81-174 -7.880 PF12796.5; A9SB38_PHYPA/440-536; Ankyrin repeats (3 copies)
5 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 240-290) 51 PfamA30U 17-51 -7.460 PF14414.4; B4EP57_BURCJ/1367-1412; A nuclease of the HNH/ENDO VII superfamily with conserved WHH
6 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 311-360) 50 PfamA30U 5-44 -6.280 20  PF03941.13; M7WDR1_RHOT1/1212-1270; Inner centromere protein, ARK binding region
7 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 431-614) 184 PfamA30U 34-182 -6.470 10  PF08942.8; Q65UI3_MANSM/15-209; Domain of unknown function (DUF1919 topsan)
8 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 1641-1750) 110 PfamA30U 5-86 -9.170 12  PF07152.10; G2IUH4_PSEUL/23-195; YaeQ protein
9 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 2018-2093) 76 PfamA30U 3-71 -7.170 13  PF13078.4; Q81F80_BACCR/8-132; Protein of unknown function (DUF3942 topsan)
10 sp|A0AVK6|E2F8_HUMAN Transcription factor E2F8 OS=Homo sapiens GN=E2F8 PE=1 SV=1 (Range: 470-543) 74 PfamA30U 36-56 -10.400 28  PF16021.3; W5K5W0_ASTMX/233-544; Programmed cell death protein 7
11 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 117-259) 143 PfamA30U 1-143 -18.700 14  PF16908.3; A7S4C6_NEMVE/141-374; Vacuolar sorting-associated protein 13, N-terminal
12 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 309-401) 93 PfamA30U 7-67 -8.100 25  PF05951.11; Q989B8_RHILO/15-167; Bacterial protein of unknown function (DUF882 topsan)
13 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 488-662) 175 PfamA30U 34-138 -8.470 15  PF16910.3; D6WCW1_TRICA/568-800; Repeating coiled region of VPS13
14 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 1275-1361) 87 PfamA30U 10-86 -8.770 PF09191.8; I3NES8_ICTTR/204-310; CD4, extracellular
15 sp|A0PJM3|GORL_HUMAN Putative exonuclease GOR-like protein OS=Homo sapiens GN=REXO1L2P PE=5 SV=2 (Range: 195-290) 96 PfamA30U 1-96 -54.900 45  PF15870.3; H3BY62_TETNG/736-900; ElonginA binding-protein 1
16 sp|A0PJM3|GORL_HUMAN Putative exonuclease GOR-like protein OS=Homo sapiens GN=REXO1L2P PE=5 SV=2 (Range: 322-408) 87 PfamA30U 1-59 -13.700 18  PF04968.10; H2ZDK2_CIOSA/146-207; CHORD
17 sp|A0PJW6|TM223_HUMAN Transmembrane protein 223 OS=Homo sapiens GN=TMEM223 PE=1 SV=1 (Range: 119-202) 84 PfamA30U 1-82 -45.000 58  PF14640.4; TM223_DANRE/69-246; Transmembrane protein 223
18 sp|A0PJX8|TMM82_HUMAN Transmembrane protein 82 OS=Homo sapiens GN=TMEM82 PE=2 SV=2 (Range: 97-285) 189 PfamA30U 1-189 -103.000 54  PF15816.3; I3JHG4_ORENI/14-319; Transmembrane protein 82
19 sp|A0PJY2|FEZF1_HUMAN Fez family zinc finger protein 1 OS=Homo sapiens GN=FEZF1 PE=2 SV=1 (Range: 106-243) 138 PfamA30U 80-130 -5.850 17  PF11788.6; Q7S1Z3_NEUCR/86-222; 39S mitochondrial ribosomal protein L46
20 sp|A0ZSE6|CC50C_HUMAN Cell cycle control protein 50C OS=Homo sapiens GN=TMEM30C PE=2 SV=2 (Range: 58-113) 56 PfamA30U 1-49 -8.260 14  PF03381.13; Q759V2_ASHGO/68-360; LEM3 (ligand-effect modulator 3) family / CDC50 family


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Bossy-Wetzel E, Barsoum MJ, Godzik A., Schwarzenbacher R, Lipton SA. Mitochondrial fission in apoptosis, neurodegeneration and aging. Curr Opin Cell Biol. 2003 Dec;15(6):706-16. Review.