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anford Burnham Prebys Medical Discovery Institute
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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 7012next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 142-330) 189 JCSG0516 79-189 -7.920 SP19049A NP_290530.1 411014 Selected-2009-11-12
2 sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2 (Range: 362-412) 51 JCSG0516 16-49 -5.610 23  RH20267B ZP_02068282.1 415517 Selected-2009-12-04
3 sp|A0AVF1|TTC26_HUMAN Tetratricopeptide repeat protein 26 OS=Homo sapiens GN=TTC26 PE=2 SV=1 (Range: 486-554) 69 JCSG0516 6-67 -5.330 18  GS10149A YP_001297505.1 384168 Purified-2010-04-01
4 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 1-215) 215 JCSG0516 18-173 -7.150 12  SP18983A NP_253302.1 413233 Purified-2010-05-11
5 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 240-290) 51 JCSG0516 12-31 -4.670 25  TM0026 TM0026 281907 Purified-2001-01-30
6 tr|A0AVG2|A0AVG2_HUMAN TRPM8 protein OS=Homo sapiens GN=TRPM8 PE=2 SV=1 (Range: 311-360) 50 JCSG0516 29-50 -5.440 18  TM1343 TM1343 372112 Purified-2001-11-06
7 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 431-614) 184 JCSG0516 12-177 -6.650 11  SP18800A ZP_02032838.1 413069 Selected-2009-11-12
8 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 1641-1750) 110 JCSG0516 7-110 -7.250 14  RH20236A NP_631770.1 415812 Selected-2009-12-04
9 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 (Range: 2018-2093) 76 JCSG0516 7-34 -6.090 21  TM0976 TM0976 282845 Purified-2001-10-30
10 sp|A0AVK6|E2F8_HUMAN Transcription factor E2F8 OS=Homo sapiens GN=E2F8 PE=1 SV=1 (Range: 470-543) 74 JCSG0516 1-56 -6.180 12  TM1555 TM1555 283412 Purified-2001-10-09
11 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 117-259) 143 JCSG0516 10-110 -8.450 SP16706A NP_811365.1 409166 Purified-2010-09-29
12 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 309-401) 93 JCSG0516 7-67 -8.330 23  SP7018A NP_286801.1 410907 Selected-2009-11-12
13 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 488-662) 175 JCSG0516 84-173 -5.720 SP17948B ZP_02026760.1 411437 Purified-2010-11-20
14 sp|A0JNW5|UH1BL_HUMAN UHRF1-binding protein 1-like OS=Homo sapiens GN=UHRF1BP1L PE=1 SV=2 (Range: 1275-1361) 87 JCSG0516 1-86 -6.020 12  FG7474A TFUS_04MAR05_CONTIG93_REVISED_GENE976 367058 Crystal|NMR-2007-03-14
15 sp|A0PJM3|GORL_HUMAN Putative exonuclease GOR-like protein OS=Homo sapiens GN=REXO1L2P PE=5 SV=2 (Range: 195-290) 96 JCSG0516 3-66 -5.300 13  SP19031A NP_285905.1 410982 Selected-2009-11-12
16 sp|A0PJM3|GORL_HUMAN Putative exonuclease GOR-like protein OS=Homo sapiens GN=REXO1L2P PE=5 SV=2 (Range: 322-408) 87 JCSG0516 1-67 -16.700 19  MA16062A 17390872 399968 Purified-2009-03-14
17 sp|A0PJW6|TM223_HUMAN Transmembrane protein 223 OS=Homo sapiens GN=TMEM223 PE=1 SV=1 (Range: 119-202) 84 JCSG0516 1-76 -5.820 17  PJ04248B NP_107828.1 374284 Crystal|NMR-2007-05-08
18 sp|A0PJX8|TMM82_HUMAN Transmembrane protein 82 OS=Homo sapiens GN=TMEM82 PE=2 SV=2 (Range: 97-285) 189 JCSG0516 2-186 -6.730 14  HM8708A 12805268 372010 Purified-2008-01-30
19 sp|A0PJY2|FEZF1_HUMAN Fez family zinc finger protein 1 OS=Homo sapiens GN=FEZF1 PE=2 SV=1 (Range: 106-243) 138 JCSG0516 38-128 -6.730 TM1241 TM1241 283106 Selected-2001-10-12
20 sp|A0ZSE6|CC50C_HUMAN Cell cycle control protein 50C OS=Homo sapiens GN=TMEM30C PE=2 SV=2 (Range: 58-113) 56 JCSG0516 3-33 -6.090 25  NB1044B NP_342954.1 367620 Purified-2006-07-25


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ye Y, Li Z, and Godzik A. Modeling and Analyzing Three-Dimensional Structures of Human Disease Proteins Pacific Symposium on Biocomputing 11:439-450(2006) [PDF]