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# Query Length Result vs. Range Score %id Covered by template(s)
1 HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508; 217 COG0516 105-217 -7.180 18  [K] KOG1657 CCAAT-binding factor, subunit C (HAP5)
H.sapiens 105-201 -8.320 sp|P43403|ZAP70_HUMAN Tyrosine-protein kinase ZAP-70 OS=Homo sapiens GN=ZAP70 PE=1 SV=1 (Range: 151-450)
HGM_OVER 1-217 -24.400 13  PB001404 Q2S5L8_SALRD/1-256 PB001404; Pfam-B_1404;
JCSG0516 1-217 -79.800 22  PX14351B NP_809182.1 395667 PDB-2009-05-07
NEW_HUMAN_DOMAINS 127-211 -5.670 sp|Q6ZVS7|F183B_HUMAN Protein FAM183B OS=Homo sapiens GN=FAM183B PE=2 SV=2 (Range: 1-135)
PDB0516 16-217 -75.100 17  4l7t_A mol:protein length:523 NanU sialic acid binding protein
PfamA30U 29-217 -45.200 17  PF14322.4; R6MDM1_9BACE/22-224; Starch-binding associating with outer membrane
SCOP206 48-217 -32.900 12  d3ckca_ a.118.8.6 (A:) Starch utilization system protein SusD {Bacteroides thetaiotaomicron [TaxId: 818]}
VFDB 1-50 -5.830 20  VFG002236(gi:49476015) (virB7) 15-kDa antigen protein VirB7 [VirB/VirD4 type IV secretion system (VF0369)] [Bartonella henselae str. Houston-1]
2 HGC00044 gi|162658718|dbj|BAAX01000887.1|1.0 TMP00920; 360 COG0516 61-148 -9.850 [U] KOG3317 Translocon-associated complex TRAP, beta subunit
H.sapiens 61-148 -9.890 11  sp|P43308|SSRB_HUMAN(removed signalp:1-17) Translocon-associated protein subunit beta OS=Homo sapiens GN=SSR2 PE=1 SV=1
HGM_OVER 63-177 -6.860 12  HGC01213 gi|163579070|dbj|BABE01006032.1|2.0 TMP01709;
JCSG0516 3-335 -22.000 18  SP0025A ZP_01961960.1 406818 Selected-2009-11-12
14-187 -36.600 28  TM0025 TM0025 281906 Purified-2001-01-30
NEW_HUMAN_DOMAINS 40-142 -6.370 sp|Q9P217|ZSWM5_HUMAN Zinc finger SWIM domain-containing protein 5 OS=Homo sapiens GN=ZSWIM5 PE=2 SV=2 (Range: 178-458)
PDB0516 14-187 -36.700 27  2x40_A mol:protein length:721 BETA-GLUCOSIDASE
PfamA30U 61-147 -9.800 PF05753.12; Q9VUZ0_DROME/9-186; Translocon-associated protein beta (TRAPB)
91-171 -14.300 22  PF14310.4; Q2TYS6_ASPOR/716-785; Fibronectin type III-like domain
SCOP206 47-187 -39.400 26  d2x42a3 b.1.31.1 (A:600-721) Beta-glucosidase C-terminal domain {Thermotoga neapolitana [TaxId: 309803]}
VFDB 41-171 -5.710 14  VFG045350(gi:16080160) (bslA/yuaB) hydrophobin BslA [BslA (VF0411)] [Bacillus subtilis subsp. subtilis str. 168]
3 HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000; 81 COG0516 1-65 -6.180 16  [S] COG3007 Uncharacterized paraquat-inducible protein B
H.sapiens 2-46 -6.960 22  sp|Q86UK0|ABCAC_HUMAN(removed signalp:1-45) ATP-binding cassette sub-family A member 12 OS=Homo sapiens GN=ABCA12 PE=1 SV=3 (Range: 1951-2250)
HGM_OVER 8-81 -2.600 15  PB017610 Q11T14_CYTH3/22-188 PB017610; Pfam-B_17610;
JCSG0516 1-81 -33.300 29  RH20388A ZP_02068619.1 416187 Selected-2009-12-04
NEW_HUMAN_DOMAINS 5-64 -6.200 10  tr|D6REQ1|D6REQ1_HUMAN Uncharacterized protein OS=Homo sapiens GN=CASP12 PE=4 SV=1 (Range: 93-168)
PDB0516 1-81 -12.500 32  5FQ7 Entity 2(prereleased)
PfamA30U 1-65 -7.980 PF07055.10; C6CTR2_PAESJ/323-385; Enoyl reductase FAD binding domain
SCOP206 4-50 -7.930 25  d2eyqa1 b.34.18.1 (A:466-545) Transcription-repair coupling factor, RRCF, middle domain {Escherichia coli [TaxId: 562]}
VFDB 1-79 -4.110 13  VFG013292(gi:16272303) (lic3A) alpha-2,3-sialyltransferase [LOS (CVF494)] [Haemophilus influenzae Rd KW20]
4 HGC00150 gi|162733542|dbj|BAAZ01030454.1|1.0 TMP01074; 227 COG0516 12-172 -7.550 12  [J] KOG3933 Mitochondrial ribosomal protein S28
H.sapiens 12-195 -6.720 11  sp|P82673|RT35_HUMAN(removed signalp:1-16) 28S ribosomal protein S35, mitochondrial OS=Homo sapiens GN=MRPS35 PE=1 SV=1
HGM_OVER 1-133 -3.550 10  PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;
JCSG0516 11-76 -6.620 10  SC.B21156A NP_600558.1 427828 Selected-2013-01-04
NEW_HUMAN_DOMAINS 2-55 -6.180 14  sp|Q8N614|TM156_HUMAN Transmembrane protein 156 OS=Homo sapiens GN=TMEM156 PE=2 SV=2 (Range: 23-89)
PDB0516 2-150 -7.590 2c41_A mol:protein length:158 DPS FAMILY DNA-BINDING STRESS RESPONSE PROTEI
PfamA30U 1-125 -7.220 PF00447.15; U5GYQ9_USTV1/99-205; HSF-type DNA-binding
SCOP206 6-150 -7.080 10  d2pyba_ a.25.1.1 (A:) Dodecameric ferritin homolog {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
VFDB 15-150 -5.820 11  VFG000307(gi:15644871) (napA) neutrophil activating protein NapA [HP-NAP (VF0052)] [Helicobacter pylori 26695]
5 HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833; 173 COG0516 4-173 -17.000 17  [R] COG3550 Uncharacterized protein related to capsule biosynthesis enzymes
H.sapiens 73-152 -7.040 18  sp|Q502W6|VWA3B_HUMAN von Willebrand factor A domain-containing protein 3B OS=Homo sapiens GN=VWA3B PE=2 SV=3 (Range: 601-900)
HGM_OVER 15-118 -3.580 PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;
JCSG0516 1-173 -39.400 17  PJ07804U NP_878967.1 374769 Crystal|NMR-2007-04-13
NEW_HUMAN_DOMAINS 29-110 -6.120 13  sp|Q14865|ARI5B_HUMAN AT-rich interactive domain-containing protein 5B OS=Homo sapiens GN=ARID5B PE=1 SV=3 (Range: 1077-1188)
PDB0516 2-173 -20.900 13  4pu3_A mol:protein length:454 Toxin-antitoxin system toxin HipA family
PfamA30U 6-120 -18.200 22  PF13657.4; A8G984_SERP5/4-104; HipA N-terminal domain
SCOP206 5-173 -16.800 17  d3dnua_ d.144.1.7 (A:) Multidrug tolerance (MDT) protein HipA N-terminal domain {Escherichia coli K-12 [TaxId: 83333]}
VFDB 21-171 -5.130 15  VFG001415(gi:15610623) (lipF) Probable esterase/lipase LipF [LipF (VF0307)] [Mycobacterium tuberculosis H37Rv]
6 HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473; 223 COG0516 1-220 -22.400 14  [K] COG5340 Predicted transcriptional regulator
H.sapiens 139-223 -8.460 12  sp|Q5XLA6|CAR17_HUMAN Caspase recruitment domain-containing protein 17 OS=Homo sapiens GN=CARD17 PE=1 SV=1
HGM_OVER 22-220 -9.160 10  PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;
JCSG0516 1-222 -27.300 10  SC.B21047A YP_001338106.1 428388 Selected-2013-01-04
NEW_HUMAN_DOMAINS 133-209 -5.720 sp|Q6ZP82|CC141_HUMAN Coiled-coil domain-containing protein 141 OS=Homo sapiens GN=CCDC141 PE=1 SV=1 (Range: 35-125)
PDB0516 1-199 -17.200 14  1zel_A mol:protein length:298 hypothetical protein Rv2827c
PfamA30U 5-91 -16.400 PF17194.2; K9SQ68_9CYAN/5-97; Transcriptional regulator, AbiEi antitoxin N-terminal domain
69-192 -13.200 15  PF09407.8; B9M298_GEODF/67-209; AbiEi antitoxin C-terminal domain
SCOP206 140-222 -7.580 12  d1dgna_ a.77.1.3 (A:) Iceberg {Human (Homo sapiens) [TaxId: 9606]}
VFDB 134-223 -4.240 10  VFG002392(gi:15610750) (espD) ESX-1 type VII secretion system EspD [ESX-1 (VF0315)] [Mycobacterium tuberculosis H37Rv]
7 HGC00248 gi|162576253|dbj|BAAV01029229.1|2.0 TMP00024; 121 COG0516 2-121 -20.300 13  [R] COG5545 Predicted P-loop ATPase and inactivated derivatives
H.sapiens 2-121 -6.780 sp|O75400|PR40A_HUMAN Pre-mRNA-processing factor 40 homolog A OS=Homo sapiens GN=PRPF40A PE=1 SV=2 (Range: 301-600)
HGM_OVER 3-121 -4.410 PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete)
JCSG0516 6-121 -41.500 40  GD5925A RER070207000754 388731 Selected-2007-09-21
NEW_HUMAN_DOMAINS 7-36 -6.130 tr|F5H0X0|F5H0X0_HUMAN Uncharacterized protein OS=Homo sapiens GN=CACNA1C PE=4 SV=1 (Range: 1-100)
PDB0516 1-55 -6.480 21  3hkz_Y mol:protein length:104 DNA-directed RNA polymerase subunit 13
PfamA30U 93-121 -6.500 PF11078.6; E0VMZ7_PEDHC/97-177; Optomotor-blind protein N-terminal region
SCOP206 16-59 -6.260 d1q2ha_ a.34.4.1 (A:) Adapter protein APS, dimerisation domain {Human (Homo sapiens) [TaxId: 9606]}
VFDB 4-121 -6.480 VFG045591(gi:52842843) (lpg2637) Dot/Icm type IV secretion system effector [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]
8 HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066; 164 COG0516 4-39 -7.020 [S] COG3763 Uncharacterized protein conserved in bacteria
H.sapiens 19-47 -7.440 25  sp|O15119|TBX3_HUMAN T-box transcription factor TBX3 OS=Homo sapiens GN=TBX3 PE=1 SV=4 (Range: 451-743)
HGM_OVER 28-164 -5.860 11  PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]
JCSG0516 4-114 -7.880 15  TM0665 TM0665 282537 PDB-2002-07-09
NEW_HUMAN_DOMAINS 2-116 -5.940 10  sp|Q8IY21|DDX60_HUMAN Probable ATP-dependent RNA helicase DDX60 OS=Homo sapiens GN=DDX60 PE=2 SV=3 (Range: 1584-1712)
PDB0516 4-114 -7.880 15  1o58_A mol:protein length:303 O-acetylserine sulfhydrylase
PfamA30U 16-106 -56.700 52  PF12957.5; R6MF37_9FIRM/540-630; Domain of unknown function (DUF3846 topsan)
SCOP206 12-129 -6.820 12  d3f5oa_ d.38.1.5 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
VFDB 1-65 -4.890 13  VFG007194(gi:28901222) (vscJ2) type III secretion system protein VscJ2 [T3SS2 (VF0409)] [Vibrio parahaemolyticus RIMD 2210633]
9 HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178; 122 COG0516 1-81 -8.120 13  [E] COG1605 Chorismate mutase
H.sapiens 4-49 -9.490 19  sp|Q02224|CENPE_HUMAN Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2 (Range: 2551-2701)
HGM_OVER 4-103 -16.900 21  HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;
JCSG0516 4-49 -8.470 13  SP18393A NP_720841.1 413750 Purified-2010-09-29
NEW_HUMAN_DOMAINS 3-36 -6.800 29  sp|Q9UQ03|COR2B_HUMAN Coronin-2B OS=Homo sapiens GN=CORO2B PE=2 SV=4 (Range: 404-480)
PDB0516 1-58 -8.620 20  4c47_A mol:protein length:207 INNER MEMBRANE LIPOPROTEIN
PfamA30U 6-89 -39.500 34  PF12958.5; D4JA63_9FIRM/5-85; Protein of unknown function (DUF3847 topsan)
SCOP206 7-76 -5.690 11  d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
VFDB 6-59 -6.610 14  VFG002458(gi:53722561) (bsaT) Type III secretion system protein BsaT [Bsa T3SS (VF0428)] [Burkholderia pseudomallei K96243]
10 HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304; 200 COG0516 4-200 -93.100 41  [R] COG3943 Virulence protein
H.sapiens 8-171 -7.920 14  sp|Q9H9Q2|CSN7B_HUMAN COP9 signalosome complex subunit 7b OS=Homo sapiens GN=COPS7B PE=1 SV=1
HGM_OVER 9-131 -4.320 18  PB006791 A6TXD6_9CLOT/1-181 PB006791; Pfam-B_6791;
JCSG0516 4-200 -93.100 41  RH8691B NP_283817.1 415755 Selected-2009-12-04
NEW_HUMAN_DOMAINS 36-136 -6.090 11  sp|O75643|U520_HUMAN U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens GN=SNRNP200 PE=1 SV=2 (Range: 92-205)
PDB0516 7-122 -7.600 11  4x90_A mol:protein length:380 Group XV phospholipase A2
PfamA30U 1-183 -90.900 41  PF13310.4; I3YIZ9_ALIFI/189-446; Virulence protein RhuM family
SCOP206 19-154 -7.000 14  d1hr6a2 d.185.1.1 (A:234-470) Mitochondrial processing peptidase (MPP) alpha chain {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
VFDB 12-200 -5.810 12  VFG002190(gi:29376987) (cpsA) undecaprenyl diphosphate synthase [Capsule (VF0361)] [Enterococcus faecalis V583]
11 HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397; 274 COG0516 132-232 -7.320 [S] COG4461 Uncharacterized protein conserved in bacteria, putative lipoprotein
H.sapiens 127-197 -7.560 21  sp|Q8IZM0|CNG1O_HUMAN Putative CNGA1-overlapping antisense gene protein OS=Homo sapiens PE=5 SV=1
HGM_OVER 198-249 -4.340 10  HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;
JCSG0516 133-197 -7.910 16  SP16518A YP_001713490.1 406299 Purified-2010-09-29
NEW_HUMAN_DOMAINS 127-225 -6.530 11  sp|P42356|PI4KA_HUMAN Phosphatidylinositol 4-kinase alpha OS=Homo sapiens GN=PI4KA PE=1 SV=3 (Range: 370-463)
PDB0516 148-226 -10.900 14  2rng_A mol:protein length:79 Big defensin
PfamA30U 8-102 -21.600 28  PF12959.5; R5RLB6_9FIRM/10-104; Protein of unknown function (DUF3848 topsan)
113-235 -72.100 40  PF12960.5; L0F7B8_DESDL/8-136; Protein of unknown function (DUF3849 topsan)
SCOP206 103-241 -7.160 12  d1tzva_ a.79.1.1 (A:) Antitermination factor NusB {Thermotoga maritima [TaxId: 2336]}
VFDB 127-233 -5.870 14  VFG002368(gi:123443286) (wbcG) putative glycosyltransferase [O-antigen (VF0392)] [Yersinia enterocolitica subsp. enterocolitica 8081]
12 HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411; 255 COG0516 1-137 -6.230 14  [U] KOG0070 GTP-binding ADP-ribosylation factor Arf1
H.sapiens 25-254 -6.920 11  sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36 PE=1 SV=2 (Range: 751-1008)
HGM_OVER 200-254 -4.640 10  PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8]
JCSG0516 1-67 -7.920 21  SP16953A ZP_02035740.1 407268 Purified-2010-09-29
NEW_HUMAN_DOMAINS 4-150 -6.850 13  sp|Q659C4|LAR1B_HUMAN La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2 (Range: 698-848)
PDB0516 5-63 -6.650 11  2krs_A mol:protein length:74 Probable enterotoxin
PfamA30U 138-248 -7.300 15  PF10278.7; A7RLX2_NEMVE/18-205; Mediator of RNA pol II transcription subunit 19
SCOP206 2-70 -7.150 13  d3f8ba_ a.4.5.0 (A:) automated matches {Lactococcus lactis [TaxId: 416870]}
VFDB 8-48 -5.820 15  VFG000158(gi:33591933) (cyaC) cyclolysin-activating lysine-acyltransferase [Cya (VF0028)] [Bordetella pertussis Tohama I]
13 HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523; 127 COG0516 1-127 -7.700 17  [R] COG4734 Antirestriction protein
H.sapiens 34-125 -6.990 12  sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7 PE=1 SV=3 (Range: 2251-2550)
HGM_OVER 51-127 -4.280 16  PB028090 gi|167758043|ref|ZP_02430170.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]gi|167663940|gb|EDS08070.1| hypothetical protein CLOSCI_00381 [Clostridium scindens ATCC 35704]
JCSG0516 24-127 -6.540 17  SP17522A ZP_02043720.1 406582 Purified-2010-09-29
NEW_HUMAN_DOMAINS 24-118 -5.310 13  sp|O94985|CSTN1_HUMAN Calsyntenin-1 OS=Homo sapiens GN=CLSTN1 PE=1 SV=1 (Range: 562-687)
PDB0516 8-127 -7.750 15  3qy4_A mol:protein length:129 Lysozyme C
PfamA30U 3-127 -91.900 61  PF12962.5; R5QVW0_9FIRM/1-126; Protein of unknown function (DUF3851 topsan)
SCOP206 16-92 -7.630 10  d1u5tb1 a.4.5.54 (B:396-489) Vacuolar protein sorting-associated protein VPS36 {Baker`s yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
VFDB 21-110 -7.400 11  VFG000758(gi:6009388) (bfpH) BfpH lipoprotein [BFP (VF0174)] [Escherichia coli B171]
14 HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561; 136 COG0516 1-100 -7.420 14  [U] COG2443 Preprotein translocase subunit Sss1
H.sapiens 23-81 -7.570 sp|Q92585|MAML1_HUMAN Mastermind-like protein 1 OS=Homo sapiens GN=MAML1 PE=1 SV=3 (Range: 601-900)
HGM_OVER 41-135 -16.900 21  HGC00311 gi|163635536|dbj|BABG01000737.1|2.0 TMP00178;
JCSG0516 37-128 -7.890 14  SP18829A NP_814273.1 410827 Purified-2010-09-29
NEW_HUMAN_DOMAINS 27-114 -5.290 12  sp|Q8NDM7|WDR96_HUMAN WD repeat-containing protein 96 OS=Homo sapiens GN=WDR96 PE=2 SV=3 (Range: 1421-1555)
PDB0516 1-73 -6.440 3zjz_A mol:protein length:149 ION TRANSPORT PROTEIN
PfamA30U 43-116 -19.800 27  PF12958.5; D4JA63_9FIRM/5-85; Protein of unknown function (DUF3847 topsan)
SCOP206 27-84 -5.510 13  d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II, PAC) {Streptococcus mutans [TaxId: 1309]}
VFDB 26-136 -5.280 16  VFG002419(gi:21281935) (coa) staphylocoagulase precursor [Staphylocoagulase (VF0421)] [Staphylococcus aureus subsp. aureus MW2]
15 HGC00518 gi|162728471|dbj|BAAY01000490.1|2.0 TMP00574; 92 COG0516 1-91 -30.800 23  [S] COG1598 Uncharacterized conserved protein
H.sapiens 7-88 -7.570 11  sp|P51178|PLCD1_HUMAN 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 OS=Homo sapiens GN=PLCD1 PE=1 SV=2 (Range: 601-756)
HGM_OVER 60-89 -3.240 10  PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]
JCSG0516 1-91 -35.400 24  TB1313D 13424859 357018 Purified-2004-07-22
NEW_HUMAN_DOMAINS 57-92 -7.070 16  sp|Q6ZU11|YD002_HUMAN Uncharacterized protein FLJ44066 OS=Homo sapiens PE=1 SV=1 (Range: 67-168)
PDB0516 1-91 -35.800 15  4p78_A mol:protein length:143 HicB3 antitoxin
PfamA30U 1-84 -28.500 21  PF15919.3; E1VAV2_HALED/3-129; HicB_like antitoxin of bacterial toxin-antitoxin system
SCOP206 9-88 -7.660 d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Norway rat (Rattus norvegicus) [TaxId: 10116]}
VFDB 36-87 -4.690 10  VFG001907(gi:15791889) (flgB) flagellar basal body rod protein FlgB [Flagella (VF0114)] [Campylobacter jejuni subsp. jejuni NCTC 11168]
16 HGC00522 gi|163636101|dbj|BABG01000172.1|3.0 TMP00580; 203 COG0516 6-201 -11.300 12  [L] KOG1906 DNA polymerase sigma
H.sapiens 3-176 -9.570 10  sp|Q5TAX3|TUT4_HUMAN Terminal uridylyltransferase 4 OS=Homo sapiens GN=ZCCHC11 PE=1 SV=3 (Range: 301-600)
HGM_OVER 112-202 -4.650 14  PB002776 gi|157737147|ref|YP_001489830.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]gi|157699001|gb|ABV67161.1| hypothetical protein Abu_0901 [Arcobacter butzleri RM4018]
JCSG0516 11-177 -17.200 17  FR14995A NP_979012.1 392879 Crystal|NMR-2009-06-15
NEW_HUMAN_DOMAINS 13-203 -5.870 11  sp|Q7Z2Z1|TICRR_HUMAN Treslin OS=Homo sapiens GN=TICRR PE=1 SV=2 (Range: 277-506)
PDB0516 10-194 -9.520 15  3nyb_A mol:protein length:323 Poly(A) RNA polymerase protein 2
18-70 -9.740 18  4wh5_A mol:protein length:162 Lincosamide resistance protein
PfamA30U 27-177 -13.200 12  PF14091.4; B0C3V0_ACAM1/8-156; Domain of unknown function (DUF4269 topsan)
SCOP206 12-68 -9.090 17  d1knya2 d.218.1.1 (A:1-125) Kanamycin nucleotidyltransferase (KNTase), N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
VFDB 5-125 -6.100 VFG000329(gi:16273440) (licD) phosphocholine transferase [LOS (VF0044)] [Haemophilus influenzae Rd KW20]
17 HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636; 115 COG0516 12-112 -8.740 17  [S] KOG4610 Uncharacterized conserved protein
H.sapiens 4-113 -10.600 18  sp|Q9BSN7|TM204_HUMAN(removed signalp:1-25) Transmembrane protein 204 OS=Homo sapiens GN=TMEM204 PE=2 SV=1
HGM_OVER 6-49 -6.170 PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;
JCSG0516 1-90 -9.590 17  SP18706A ZP_01994502.1 410744 Selected-2009-11-12
NEW_HUMAN_DOMAINS 34-72 -6.060 15  sp|Q9BZC7|ABCA2_HUMAN ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2 PE=1 SV=3 (Range: 1428-1583)
PDB0516 1-96 -8.810 18  5fz2_A mol:protein length:904 ENVELOPE GLYCOPROTEIN B
PfamA30U 8-113 -73.900 65  PF12963.5; R7EKX0_9FIRM/6-110; Protein of unknown function (DUF3852 topsan)
SCOP206 32-95 -6.540 10  d3cuqa2 a.4.5.0 (A:176-252) automated matches {Human (Homo sapiens) [TaxId: 9606]}
VFDB 1-114 -8.680 13  VFG002231(gi:49476010) (virB2) type IV secretion system major pilin subunit VirB2 protein homolog [VirB/VirD4 type IV secretion system (VF0369)] [Bartonella henselae str. Houston-1]
18 HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669; 125 COG0516 54-118 -9.500 23  [L] COG4220 Phage DNA packaging protein, Nu1 subunit of terminase
H.sapiens 57-106 -6.310 27  sp|Q9BUE6|ISCA1_HUMAN Iron-sulfur cluster assembly 1 homolog, mitochondrial OS=Homo sapiens GN=ISCA1 PE=2 SV=1
HGM_OVER 13-125 -3.240 10  PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;
JCSG0516 1-109 -7.810 16  FL10792A YP_325043.1 376107 Crystal|NMR-2007-06-23
NEW_HUMAN_DOMAINS 24-103 -5.260 sp|Q9P2D8|UNC79_HUMAN Protein unc-79 homolog OS=Homo sapiens GN=UNC79 PE=2 SV=3 (Range: 1264-1440)
PDB0516 54-118 -11.600 20  1j9i_A mol:protein length:68 TERMINASE SMALL SUBUNIT
PfamA30U 7-106 -55.800 28  PF12964.5; D6D3K5_9BACE/4-98; Protein of unknown function (DUF3853 topsan)
SCOP206 54-118 -11.600 20  d1j9ia_ a.6.1.5 (A:) Terminase gpNU1 subunit domain {Bacteriophage lambda [TaxId: 10710]}
VFDB 58-91 -5.980 17  VFG042447(gi:145699) (daaF) DaaF protein [F1845 fimbrial adhesin (AI016)] [Escherichia coli str. C1845]
19 HGC00579 gi|163284429|dbj|BABD01026259.1|2.0 TMP00679; 172 COG0516 1-145 -10.300 [M] COG4571 Outer membrane protease
H.sapiens 142-172 -7.510 sp|Q2M1Z3|RHG31_HUMAN Rho GTPase-activating protein 31 OS=Homo sapiens GN=ARHGAP31 PE=1 SV=2 (Range: 301-600)
HGM_OVER 59-167 -3.410 PB004718 Q5LIA4_BACFN/1-189 PB004718; Pfam-B_4718;
JCSG0516 1-172 -41.000 20  SP16554F YP_001303689.1 412633 Selected-2009-11-12
NEW_HUMAN_DOMAINS 48-171 -6.170 11  sp|Q96MK2|FA65C_HUMAN Protein FAM65C OS=Homo sapiens GN=FAM65C PE=2 SV=4 (Range: 191-319)
PDB0516 1-148 -11.600 2x4m_A mol:protein length:298 COAGULASE/FIBRINOLYSIN
PfamA30U 1-143 -12.000 12  PF14905.4; R5P1C8_9PORP/377-793; Outer membrane protein beta-barrel family
SCOP206 1-167 -9.520 d2pora_ f.4.3.1 (A:) Porin {Rhodobacter capsulatus [TaxId: 1061]}
VFDB 1-145 -10.300 VFG000417(gi:16082686) (pla) plasminogen activator protease precursor [Pla (VF0139)] [Yersinia pestis CO92]
20 HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709; 112 COG0516 3-57 -8.020 17  [K] COG5149 Transcription initiation factor IIA, large chain
H.sapiens 17-48 -9.040 36  sp|Q05209|PTN12_HUMAN Tyrosine-protein phosphatase non-receptor type 12 OS=Homo sapiens GN=PTPN12 PE=1 SV=3 (Range: 601-780)
HGM_OVER 6-62 -8.450 28  HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;
JCSG0516 3-108 -9.560 17  C.LS21349A NP_420460.1 430467 Purified-2014-07-08
NEW_HUMAN_DOMAINS 1-64 -7.400 18  tr|E7ETZ9|E7ETZ9_HUMAN Uncharacterized protein OS=Homo sapiens GN=ANKLE1 PE=4 SV=2 (Range: 315-476)
PDB0516 3-57 -8.330 15  1rm1_C mol:protein length:286 Transcription initiation factor IIA large cha
PfamA30U 8-100 -44.400 33  PF16479.3; Q5L9L8_BACFN/5-97; Domain of unknown function (DUF5056 topsan)
SCOP206 1-59 -5.730 11  d1xvxa_ c.94.1.1 (A:) Ferric-binding protein FbpA {Yersinia enterocolitica, YfuA [TaxId: 630]}
VFDB 18-100 -5.990 13  VFG045542(gi:52842003) (lpg1776) Dot/Icm type IV secretion system effector [Dot/Icm (VF0156)] [Legionella pneumophila subsp. pneumophila str. Philadelphia 1]


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Bossy-Wetzel E, Barsoum MJ, Godzik A., Schwarzenbacher R, Lipton SA. Mitochondrial fission in apoptosis, neurodegeneration and aging. Curr Opin Cell Biol. 2003 Dec;15(6):706-16. Review.