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anford Burnham Prebys Medical Discovery Institute
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Filter & download results: Zscore <   Identity ≥(%)   Query residues aligned ≥(%)   Max number of homologs:   Template Database:

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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 3877next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 ACL93468.1 301 NEW_HUMAN_DOMAINS 148-207 -5.690 20  sp|Q9Y6X0|SETBP_HUMAN SET-binding protein OS=Homo sapiens GN=SETBP1 PE=1 SV=3 (Range: 1032-1093)
2 ACL93469.1 199 NEW_HUMAN_DOMAINS 56-99 -5.040 13  sp|Q9HAI6|CX021_HUMAN Uncharacterized protein CXorf21 OS=Homo sapiens GN=CXorf21 PE=2 SV=1 (Range: 104-161)
3 ACL93470.1 285 NEW_HUMAN_DOMAINS 68-144 -6.330 tr|A6NMH3|A6NMH3_HUMAN Uncharacterized protein OS=Homo sapiens GN=TNNI3K PE=4 SV=1 (Range: 25-169)
4 ACL93471.1 199 NEW_HUMAN_DOMAINS 38-170 -5.180 19  sp|Q8TDY2|RBCC1_HUMAN RB1-inducible coiled-coil protein 1 OS=Homo sapiens GN=RB1CC1 PE=1 SV=3 (Range: 676-801)
5 ACL93472.1 237 NEW_HUMAN_DOMAINS 50-166 -5.400 12  tr|B6ZDQ0|B6ZDQ0_HUMAN Uncharacterized protein OS=Homo sapiens GN=THADA PE=4 SV=1 (Range: 1250-1449)
6 ACL93473.1 262 NEW_HUMAN_DOMAINS 23-87 -5.040 20  tr|D6RF31|D6RF31_HUMAN Uncharacterized protein OS=Homo sapiens GN=ANK3 PE=4 SV=1 (Range: 1-86)
7 ACL93474.1 96 NEW_HUMAN_DOMAINS 1-84 -7.430 sp|Q8TBZ2|MYBPP_HUMAN MYCBP-associated protein OS=Homo sapiens GN=MYCBPAP PE=1 SV=2 (Range: 521-616)
8 ACL93475.1 490 NEW_HUMAN_DOMAINS 164-301 -6.230 13  sp|Q8IVG5|SAM9L_HUMAN Sterile alpha motif domain-containing protein 9-like OS=Homo sapiens GN=SAMD9L PE=1 SV=2 (Range: 687-863)
9 ACL93476.1 206 NEW_HUMAN_DOMAINS 19-168 -5.140 12  sp|A6NNL5|CO061_HUMAN Uncharacterized protein C15orf61 OS=Homo sapiens GN=C15orf61 PE=2 SV=2 (Range: 1-157)
10 ACL93477.1 631 NEW_HUMAN_DOMAINS 377-497 -6.850 19  sp|O43301|HS12A_HUMAN Heat shock 70 kDa protein 12A OS=Homo sapiens GN=HSPA12A PE=1 SV=2 (Range: 520-675)
11 ACL93478.1 385 NEW_HUMAN_DOMAINS 98-204 -6.870 18  sp|Q5T197|DCST1_HUMAN DC-STAMP domain-containing protein 1 OS=Homo sapiens GN=DCST1 PE=2 SV=1 (Range: 596-684)
12 ACL93479.1 903 NEW_HUMAN_DOMAINS 650-755 -5.580 14  tr|B0QYN4|B0QYN4_HUMAN L(3)mbt-like (Drosophila) (Fragment) OS=Homo sapiens GN=L3MBTL PE=4 SV=1 (Range: 1-108)
13 ACL93480.1 940 NEW_HUMAN_DOMAINS 568-640 -7.420 13  sp|O60813|PRA11_HUMAN PRAME family member 11 OS=Homo sapiens GN=PRAMEF11 PE=2 SV=3 (Range: 1-79)
14 ACL93481.1 158 NEW_HUMAN_DOMAINS 2-68 -5.750 18  sp|O95260|ATE1_HUMAN Arginyl-tRNA--protein transferase 1 OS=Homo sapiens GN=ATE1 PE=1 SV=2 (Range: 433-518)
15 ACL93482.1 183 NEW_HUMAN_DOMAINS 61-182 -5.170 10  sp|A4D0V7|CG058_HUMAN Uncharacterized protein C7orf58 OS=Homo sapiens GN=C7orf58 PE=2 SV=1 (Range: 69-215)
16 ACL93483.1 150 NEW_HUMAN_DOMAINS 54-138 -5.500 sp|Q6ZS81|WDFY4_HUMAN WD repeat- and FYVE domain-containing protein 4 OS=Homo sapiens GN=WDFY4 PE=1 SV=3 (Range: 1588-1829)
17 ACL93484.1 79 NEW_HUMAN_DOMAINS 10-75 -6.470 10  tr|C9JAG6|C9JAG6_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1 (Range: 1-83)
18 ACL93485.1 349 NEW_HUMAN_DOMAINS 269-322 -5.460 18  sp|Q6IQ32|ADNP2_HUMAN ADNP homeobox protein 2 OS=Homo sapiens GN=ADNP2 PE=2 SV=1 (Range: 210-266)
19 ACL93486.1 210 NEW_HUMAN_DOMAINS 90-170 -4.950 16  sp|Q96RE7|NACC1_HUMAN Nucleus accumbens-associated protein 1 OS=Homo sapiens GN=NACC1 PE=1 SV=1 (Range: 296-396)
20 ACL93487.1 74 NEW_HUMAN_DOMAINS 21-55 -5.650 22  sp|Q12947|FOXF2_HUMAN Forkhead box protein F2 OS=Homo sapiens GN=FOXF2 PE=1 SV=2 (Range: 193-254)


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Bossy-Wetzel E, Barsoum MJ, Godzik A., Schwarzenbacher R, Lipton SA. Mitochondrial fission in apoptosis, neurodegeneration and aging. Curr Opin Cell Biol. 2003 Dec;15(6):706-16. Review.