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anford Burnham Prebys Medical Discovery Institute
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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 1693next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|11497090|ref|NP_051162.1| hypothetical protein (BB_P01) [Borrelia burgdorferi B31] 407 PfamA30U 13-382 -84.900 14  PF06381.9; Q11J16_CHESB/39-389; Protein of unknown function (DUF1073 topsan)
2 gi|11497091|ref|NP_051163.1| hypothetical protein (BB_P02) [Borrelia burgdorferi B31] 230 PfamA30U 1-223 -110.000 96  PF07094.9; Q9RZX9_BORBU/1-223; Protein of unknown function (DUF1357 topsan)
3 gi|11497092|ref|NP_051164.1| hypothetical protein (BB_P03) [Borrelia burgdorferi B31] 185 PfamA30U 1-184 -97.400 51  PF02989.12; Q9S0D2_BORBU/1-190; Lyme disease proteins of unknown function
4 gi|11497093|ref|NP_051165.1| hypothetical protein (BB_P04) [Borrelia burgdorferi B31] 254 PfamA30U 46-247 -83.600 37  PF02989.12; Q9S0D2_BORBU/1-190; Lyme disease proteins of unknown function
5 gi|11497094|ref|NP_051166.1| hypothetical protein (BB_P05) [Borrelia burgdorferi B31] 190 PfamA30U 1-189 -106.000 88  PF02989.12; Q9S0D2_BORBU/1-190; Lyme disease proteins of unknown function
6 gi|11497064|ref|NP_051167.1| hypothetical protein (BB_P06) [Borrelia burgdorferi B31] 324 PfamA30U 56-320 -9.480 13  PF09950.7; H8L668_FRAAD/90-334; Uncharacterized protein conserved in bacteria (DUF2184 topsan)
7 gi|11497065|ref|NP_051168.1| hypothetical protein (BB_P07) [Borrelia burgdorferi B31] 153 PfamA30U 1-78 -36.500 32  PF13029.4; O50935_BORBU/1-84; Domain of unknown function (DUF3890 topsan)
8 gi|11497066|ref|NP_051169.1| hypothetical protein (BB_P08) [Borrelia burgdorferi B31] 133 PfamA30U 7-133 -87.300 92  PF07405.9; Q9R2M2_BORBU/1-127; Protein of unknown function (DUF1506 topsan)
9 gi|11497067|ref|NP_051170.1| hypothetical protein (BB_P09) [Borrelia burgdorferi B31] 129 PfamA30U 1-46 -13.500 23  PF05069.11; A1VSG9_POLNA/4-154; Phage virion morphogenesis family
10 gi|11497068|ref|NP_051171.1| hypothetical protein (BB_P10) [Borrelia burgdorferi B31] 188 PfamA30U 1-179 -110.000 92  PF05561.9; Q9S0C9_BORBU/1-180; Borrelia burgdorferi protein of unknown function (DUF764 topsan)
11 gi|11497095|ref|NP_051172.1| hypothetical protein (BB_P11) [Borrelia burgdorferi B31] 370 PfamA30U 1-361 -139.000 95  PF05619.9; Q9S003_BORBU/1-362; Borrelia burgdorferi protein of unknown function (DUF787 topsan)
12 gi|11497096|ref|NP_051173.1| hypothetical protein (BB_P12) [Borrelia burgdorferi B31] 142 PfamA30U 3-139 -108.000 98  PF07316.9; Q9S050_BORBU/3-139; Protein of unknown function (DUF1463 topsan)
13 gi|11497097|ref|NP_051174.1| hypothetical protein (BB_P13) [Borrelia burgdorferi B31] 151 PfamA30U 3-147 -92.300 44  PF07341.9; Q6ASH9_BORBP/1-163; Protein of unknown function (DUF1473 topsan)
14 gi|11497098|ref|NP_051175.1| hypothetical protein (BB_P14) [Borrelia burgdorferi B31] 78 PfamA30U 1-78 -59.600 94  PF07032.9; Q9S0C7_BORBU/1-78; Protein of unknown function (DUF1322 topsan)
15 gi|11497099|ref|NP_051176.1| hypothetical protein (BB_P15) [Borrelia burgdorferi B31] 424 PfamA30U 1-422 -84.800 94  PF05537.9; Q9S0I6_BORBU/1-422; Borrelia burgdorferi protein of unknown function (DUF759 topsan)
16 gi|11497100|ref|NP_051177.1| hypothetical protein (BB_P16) [Borrelia burgdorferi B31] 227 PfamA30U 20-227 -122.000 88  PF05632.9; Q9S092_BORBU/6-213; Borrelia burgdorferi protein of unknown function (DUF792 topsan)
17 gi|11497101|ref|NP_051178.1| hypothetical protein (BB_P17) [Borrelia burgdorferi B31] 316 PfamA30U 1-311 -136.000 99  PF05113.11; Q9S0F4_BORBU/1-311; Protein of unknown function (DUF693 topsan)
18 gi|11497102|ref|NP_051179.1| hypothetical protein (BB_P18) [Borrelia burgdorferi B31] 181 PfamA30U 1-181 -107.000 100  PF05606.9; Q9R2V1_BORBU/1-181; Borrelia burgdorferi protein of unknown function (DUF777 topsan)
19 gi|11497069|ref|NP_051180.1| hypothetical protein (BB_P19) [Borrelia burgdorferi B31] 110 PfamA30U 14-99 -23.900 PF10934.6; A5I4A4_CLOBH/29-134; Protein of unknown function (DUF2634 topsan)
20 gi|11497070|ref|NP_051181.1| hypothetical protein (BB_P20) [Borrelia burgdorferi B31] 291 PfamA30U 1-290 -128.000 100  PF03434.11; Q9R331_BORBU/1-290; DUF276 topsan


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Bossy-Wetzel E, Barsoum MJ, Godzik A., Schwarzenbacher R, Lipton SA. Mitochondrial fission in apoptosis, neurodegeneration and aging. Curr Opin Cell Biol. 2003 Dec;15(6):706-16. Review.