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anford Burnham Prebys Medical Discovery Institute
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Shows best template from each database, and all templates with significant scores covering different query fragments

Results: 1-20 of 1693next page >

# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|11497090|ref|NP_051162.1| hypothetical protein (BB_P01) [Borrelia burgdorferi B31] 407 JCSG0516 8-407 -80.800 17  RH10244A YP_001714331.1 415782 Selected-2009-12-04
2 gi|11497091|ref|NP_051163.1| hypothetical protein (BB_P02) [Borrelia burgdorferi B31] 230 JCSG0516 64-143 -6.050 18  TB1124D NP_249784.1 357791 Purified-2004-06-11
3 gi|11497092|ref|NP_051164.1| hypothetical protein (BB_P03) [Borrelia burgdorferi B31] 185 JCSG0516 2-185 -100.000 82  PU6478A NP_051250.1 381700 Crystal|NMR-2009-03-07
4 gi|11497093|ref|NP_051165.1| hypothetical protein (BB_P04) [Borrelia burgdorferi B31] 254 JCSG0516 46-248 -84.600 36  PC02989A NP_051166.1 360700 Crystal|NMR-2006-10-11
5 gi|11497094|ref|NP_051166.1| hypothetical protein (BB_P05) [Borrelia burgdorferi B31] 190 JCSG0516 1-190 -110.000 100  PC02989A NP_051166.1 360700 Crystal|NMR-2006-10-11
6 gi|11497064|ref|NP_051167.1| hypothetical protein (BB_P06) [Borrelia burgdorferi B31] 324 JCSG0516 126-315 -5.630 10  RH20054A YP_001635660.1 415177 Selected-2009-12-04
7 gi|11497065|ref|NP_051168.1| hypothetical protein (BB_P07) [Borrelia burgdorferi B31] 153 JCSG0516 1-98 -7.330 14  TM0090 TM0090 281971 Purified-2001-08-24
8 gi|11497066|ref|NP_051169.1| hypothetical protein (BB_P08) [Borrelia burgdorferi B31] 133 JCSG0516 22-130 -27.200 FP12979B DHAF_12NOV03_CONTIG1046_REVISED_GENE1067 383920 Purified-2007-12-12
9 gi|11497067|ref|NP_051170.1| hypothetical protein (BB_P09) [Borrelia burgdorferi B31] 129 JCSG0516 2-36 -7.790 14  SP19313A NP_249364.1 413384 Purified-2010-09-29
10 gi|11497068|ref|NP_051171.1| hypothetical protein (BB_P10) [Borrelia burgdorferi B31] 188 JCSG0516 5-175 -6.050 SC.B21167A YP_384095.1 428704 Selected-2013-01-04
11 gi|11497095|ref|NP_051172.1| hypothetical protein (BB_P11) [Borrelia burgdorferi B31] 370 JCSG0516 1-369 -127.000 48  PC05619A NP_045719.1 360717 Crystal|NMR-2006-02-19
12 gi|11497096|ref|NP_051173.1| hypothetical protein (BB_P12) [Borrelia burgdorferi B31] 142 JCSG0516 17-135 -7.170 18  FK7706B YP_324227.1 371471 Crystal|NMR-2007-01-05
13 gi|11497097|ref|NP_051174.1| hypothetical protein (BB_P13) [Borrelia burgdorferi B31] 151 JCSG0516 43-87 -6.330 22  TM0526 TM0526 282399 Purified-2001-10-10
14 gi|11497098|ref|NP_051175.1| hypothetical protein (BB_P14) [Borrelia burgdorferi B31] 78 JCSG0516 8-73 -5.880 21  SC.B21204A ZP_01994184.1 428871 Selected-2013-01-04
15 gi|11497099|ref|NP_051176.1| hypothetical protein (BB_P15) [Borrelia burgdorferi B31] 424 JCSG0516 1-399 -11.000 10  SP13496P NP_810739.1 408731 Selected-2009-11-12
14-364 -14.600 CC20746A NP_420296.1 423187 Purified-2011-04-15
16 gi|11497100|ref|NP_051177.1| hypothetical protein (BB_P16) [Borrelia burgdorferi B31] 227 JCSG0516 15-177 -6.460 TM1586 TM1586 283443 PDB-2004-06-24
17 gi|11497101|ref|NP_051178.1| hypothetical protein (BB_P17) [Borrelia burgdorferi B31] 316 JCSG0516 26-98 -6.490 23  EC5331A NP_417108.2 358304 Purified-2004-06-01
18 gi|11497102|ref|NP_051179.1| hypothetical protein (BB_P18) [Borrelia burgdorferi B31] 181 JCSG0516 3-178 -83.200 32  PJ05606B NP_045729.1 374248 Crystal|NMR-2007-05-22
19 gi|11497069|ref|NP_051180.1| hypothetical protein (BB_P19) [Borrelia burgdorferi B31] 110 JCSG0516 2-110 -32.800 18  PE00139C YP_389879.1 367918 Purified-2006-06-19
20 gi|11497070|ref|NP_051181.1| hypothetical protein (BB_P20) [Borrelia burgdorferi B31] 291 JCSG0516 2-291 -7.830 11  RH10602A NP_815200.1 416148 Selected-2009-12-04


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ye Y, Li Z, and Godzik A. Modeling and Analyzing Three-Dimensional Structures of Human Disease Proteins Pacific Symposium on Biocomputing 11:439-450(2006) [PDF]