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anford Burnham Prebys Medical Discovery Institute
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Shows best template from each database, and all templates with significant scores covering different query fragments

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# Query Length Result vs. Range Score %id Covered by template(s)
1 gi|30260196|ref|NP_842573.1| chromosomal replication initiation protein (BA_0001) [Bacillus anthracis str. Ames] 446 JCSG0516 1-446 -127.000 32  C.LS21333A NP_418828.1 430427 Purified-2014-07-08
2 gi|30260197|ref|NP_842574.1| DNA polymerase III subunit beta (BA_0002) [Bacillus anthracis str. Ames] 379 JCSG0516 1-378 -107.000 41  XB5465A NP_344555.1 358603 PDB-2005-08-31
3 gi|30260198|ref|NP_842575.1| hypothetical protein (BA_0003) [Bacillus anthracis str. Ames] 70 JCSG0516 11-60 -12.400 20  SP0223F ZP_04009405.1 413831 Purified-2010-09-29
4 gi|30260199|ref|NP_842576.1| recombination protein F (BA_0004) [Bacillus anthracis str. Ames] 375 JCSG0516 1-374 -22.400 15  NT12358C DHAF_12NOV03_CONTIG1086_REVISED_GENE3509 378730 Purified-2008-01-24
5 gi|30260200|ref|NP_842577.1| DNA gyrase subunit B (BA_0005) [Bacillus anthracis str. Ames] 640 JCSG0516 9-640 -201.000 55  TM0833 TM0833 282703 Purified-2005-04-05
6 gi|30260201|ref|NP_842578.1| DNA gyrase subunit A (BA_0006) [Bacillus anthracis str. Ames] 823 JCSG0516 7-809 -206.000 46  TM1084 TM1084 282951 Purified-2001-04-24
7 gi|30260202|ref|NP_842579.1| inosine 5'-monophosphate dehydrogenase (BA_0008) [Bacillus anthracis str. Ames] 487 JCSG0516 7-487 -139.000 60  TM1347 TM1347 283208 PDB-2005-02-22
8 gi|30260203|ref|NP_842580.1|(removed signalp:1-28) D-alanyl-D-alanine carboxypeptidase (BA_0009) [Bacillus anthracis str. Ames] 407 JCSG0516 12-270 -21.300 17  SP13251A NP_344563.1 413807 Purified-2010-09-29
9 gi|30260204|ref|NP_842581.1| pyridoxal biosynthesis lyase PdxS (BA_0010) [Bacillus anthracis str. Ames] 295 JCSG0516 14-252 -8.710 20  TM0140 TM0140 282020 PDB-2002-07-03
10 gi|30260205|ref|NP_842582.1| glutamine amidotransferase subunit PdxT (BA_0011) [Bacillus anthracis str. Ames] 196 JCSG0516 2-196 -25.800 19  GS13863A YP_001304547.1 384475 Purified-2008-06-17
11 gi|30260206|ref|NP_842583.1| seryl-tRNA synthetase (BA_0012) [Bacillus anthracis str. Ames] 424 JCSG0516 1-419 -136.000 56  TM1379 TM1379 283240 Crystal|NMR-2004-06-10
12 gi|30260207|ref|NP_842584.1| hypothetical protein (BA_0013) [Bacillus anthracis str. Ames] 183 JCSG0516 49-181 -8.000 21  KN.B21271A.GTF2B BC020597 429637 Selected-2013-03-25
13 gi|30260208|ref|NP_842585.1| deoxynucleoside kinase family protein (BA_0014) [Bacillus anthracis str. Ames] 222 JCSG0516 14-217 -20.100 14  XB5769A 13814386 358907 Purified-2005-05-02
14 gi|30260209|ref|NP_842586.1| deoxynucleoside kinase family protein (BA_0015) [Bacillus anthracis str. Ames] 211 JCSG0516 5-209 -23.100 11  XB5769A 13814386 358907 Purified-2005-05-02
15 gi|30260210|ref|NP_842587.1| isochorismatase family protein (BA_0016) [Bacillus anthracis str. Ames] 179 JCSG0516 2-171 -77.000 26  TM0475 TM0475 282348 Purified-2004-01-07
16 gi|30260211|ref|NP_842588.1|(removed signalp:1-24) hypothetical protein (BA_0017) [Bacillus anthracis str. Ames] 22 JCSG0516 1-22 -3.970 27  SP18643A YP_001333818.1 411757 Selected-2009-11-12
17 gi|30260212|ref|NP_842589.1| cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein (BA_0018) [Bacillus anthracis str. Ames] 166 JCSG0516 6-154 -32.800 38  TM1828 TM1828 283681 PDB-2006-08-04
18 gi|30260213|ref|NP_842590.1| DNA polymerase III subunits gamma and tau (BA_0019) [Bacillus anthracis str. Ames] 562 JCSG0516 4-536 -133.000 33  TM0686 TM0686 282556 Purified-2001-02-28
19 gi|30260214|ref|NP_842591.1| hypothetical protein (BA_0020) [Bacillus anthracis str. Ames] 109 JCSG0516 4-108 -52.800 23  TM0687 TM0687 282557 Purified-2001-02-22
20 gi|30260215|ref|NP_842592.1| recombination protein RecR (BA_0021) [Bacillus anthracis str. Ames] 198 JCSG0516 29-193 -8.970 18  1790429 1790429 355840 PDB-2004-04-30


FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Ye Y, Li Z, and Godzik A. Modeling and Analyzing Three-Dimensional Structures of Human Disease Proteins Pacific Symposium on Biocomputing 11:439-450(2006) [PDF]